Megalobrama amblycephala (Wuchang bream): 125274223
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Entry
125274223 CDS
T08212
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04140
Autophagy - animal
mamb04148
Efferocytosis
mamb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125274223 (vps16)
04148 Efferocytosis
125274223 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125274223 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125274223 (vps16)
Membrane trafficking [BR:
mamb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
125274223 (vps16)
Hops complex
125274223 (vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF4026_N
Motif
Other DBs
NCBI-GeneID:
125274223
NCBI-ProteinID:
XP_048056389
LinkDB
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Position
LG8:29055459..29071262
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AA seq
835 aa
AA seq
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MAFVTANWNPLGEAFYRKIELYEMGWNLKDGLRDCLVAAAPYGGPIALLKERNRRSPSAR
PQLEIYSSSGLPLASFPWKSGVVKQLGWTVSDDLLCVQEDGTVLVYDLFGGFKRHFSMGN
EVSQSQVLETKIFHSPYGTGVAILTGTLRFTLATNIDDIKLRRLPEIPGLQGAPSSWAVL
TQDRQCKVLVASESHLFILDNTACTSVTPPGLSPEASSIVHICVSFSYKYLALLTDSGHV
WMGTSNLKEKLSEVDTKIKTPPKQMAWCRRPKSQQPSAVVMWDGLLLVVGECKETIKYHL
DDESILVPELDSVRIISGTHHELLQEVPGACEEIFKIASMAPGALLLEAHKEYEKESQKA
DEYLREIKEQSLLSEAVRQCVEAAGHEHEPETQKTLLRAASFGKCFLSNFPPEQFVSMCR
DLRVLNAVRDYTVGIPLTHTQFKQMTVQVLIDRLVYRKLYPLAIEVCRYLKTPEYQGVSR
VLKHWACYKVQQKEESDEVIAKSVSVKLADAAGISYSEIATKAYESGRTELAIKLLEFEP
RSGEQVPLLLKMKKSPLALSKAIESGDTDLVYTVVMYLKNELNRGDFFMMLRNQPVALSL
YRQFCKHQEQETLKDLFNQDDDHEELGNFYVKASYKEQRLEARIALLQSAVDEYYKAKNE
FSAKATEDEMRLLRFQRKLEEEKGEPLVGFSLHDTMTMLLSVGLHKQAEQLYKDFKVPDK
RFWWLKLKALAEKEDWEELEKFAKSKKSPIGYLPFVEVCIKHHNKYEAKKYVSKVTPEQK
VKAHLAVGDVEGAAEAAIERRNESEISTVLSRCSSTTDHILVERLNRAKATAAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgtcacagcgaactggaaccctttgggcgaggctttttacagaaagattgaa
ttgtatgagatgggctggaatctgaaagatggtctgagagactgtctagtcgctgcagct
ccatatgggggtcccatcgctctcctaaaggagcgcaaccgacgctctcccagtgccaga
cctcagttggagatctactcttcctcaggactgcctctggccagttttccatggaagagt
ggagtggtgaagcagttgggttggacagtgtctgatgacctactgtgtgttcaggaggat
ggcactgtgcttgtctatgatctctttggtggcttcaagagacacttcagcatgggcaat
gaagtttctcagagtcaggtgctggagaccaagattttccattcaccgtacgggacagga
gttgccatattgacgggtaccttgcgattcactttggccacgaacattgacgacataaaa
ctgaggcggttacctgaaattccaggtctacagggggcgccttcatcctgggcagtcctg
actcaggacaggcaatgtaaagtgctggtggccagtgaatctcatctgttcatcttagac
aatacagcctgcacatctgtgactcctccaggtctctctccagaagcatccagtatagtt
cacatatgtgtctcattcagttataagtatctggcactcctcactgactctggtcatgtg
tggatgggcacgtccaatctaaaggagaaactcagtgaggtggacaccaaaatcaaaact
ccccccaaacagatggcctggtgtcgcaggcccaagagtcagcagccgtcggctgtggtc
atgtgggatgggcttctcctagtggtgggagagtgtaaagaaacaattaagtaccacctg
gacgatgaatcgattctggtgccagaactggacagcgtccggatcatcagtggaacgcac
catgagcttctgcaagaggtcccaggtgcatgtgaggagatctttaaaattgcctcaatg
gctcctggagcattactgctggaggcacataaagaatatgagaaagagagtcagaaggca
gatgagtatctgagagagattaaagaacagagtctgctgagcgaggcagtgaggcagtgt
gtggaggccgctggacatgaacatgaacctgagactcagaaaactctcctgagggcggcc
tcatttgggaagtgctttttgagtaattttcctccagagcagtttgtcagcatgtgtaga
gacctgcgggtgttgaatgcagtacgagactataccgtcggcattccacttacccacact
cagttcaaacagatgaccgtacaggtgctcatcgacagactggtgtatcgtaaactctat
ccactggctattgaggtttgccgctatctaaagactccagaatatcagggagtgagccga
gtactcaaacactgggcctgctacaaggtccagcagaaggaggaatcagatgaagtcata
gcaaaatctgtgagtgtgaagctagctgatgctgcaggaatctcctactctgaaatcgcc
actaaagcatatgagagtggacgcacagagctcgccattaagttgttggagtttgagcct
cgctctggtgagcaggtcccactgttgttaaaaatgaagaagagtcctctagctttgagc
aaagccattgagagtggagacacagacctcgtgtacacagtggtcatgtacctgaagaat
gagctgaatagaggagacttcttcatgatgctgaggaaccaacctgtggctctgagcctc
tacagacagttctgtaaacatcaagaacaggaaacactgaaagatcttttcaatcaagat
gatgatcatgaagaacttggcaatttctatgtaaaggccagctataaagagcagagactg
gaagctcggattgctcttttacaaagtgccgtggacgagtactacaaagccaagaatgaa
ttttctgccaaggccacagaagatgagatgcgtctcctgcggtttcagaggaagctagag
gaagagaagggtgagccgcttgtgggattctctcttcatgacaccatgaccatgctgctg
tcagtgggactgcacaaacaagccgaacaactttacaaagacttcaaagtgccagacaag
aggttctggtggctgaagttgaaggctctggctgagaaggaggactgggaagagctggag
aaatttgccaaaagcaaaaagtctcctattggatatctgccgtttgttgaagtgtgcatt
aaacaccataacaaatatgaagccaagaaatatgtctctaaagtcacacctgagcagaag
gtcaaagctcaccttgcagtgggggatgtggaaggtgccgcagaggctgccatcgagagg
cgtaatgaatccgagatcagtactgttctgtcacgctgttcatccaccactgatcatatt
ctggtggagcgcctcaaccgtgctaaagccactgctgccaaaaaatga
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