Megalobrama amblycephala (Wuchang bream): 125274417
Help
Entry
125274417 CDS
T08212
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125274417
04020 Calcium signaling pathway
125274417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125274417
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125274417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Cytochrom_B558a
Motif
Other DBs
NCBI-GeneID:
125274417
NCBI-ProteinID:
XP_048056781
LinkDB
All DBs
Position
LG8:complement(34427552..34482595)
Genome browser
AA seq
1997 aa
AA seq
DB search
MMVILLNCVTLGMYQPCENIDCSSDRCQILQAFDAFIYIFFALEMVVKMVALGIFGRRCY
MGDTWNRLDFFIVMAGVVEYSLDLQNINLTAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEENFTLLTGVALPAPYYSPNEDDE
RPFICSLPQDNGIMSCGDVPARRVAGHQCCLDVDDLLHHQALGLVTEPFLNASAFVPGLC
VNWNRYYTRCHTGHRNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFI
YFILLIIVGSFFMINLCLVVIATQFSETKQREHQLMQEQRAACLSSSTLASLSEPGDCYE
EIFQLVCHVLRKARRRTAAFFRTLCCKPPEQTHEKTNANGGEKSLQQHDGATPAASAANQ
ETEEDTAEETDRCQREKGACRERSRELWMEMRVKLWGIVESKYFNRGIMVAILINTISMG
IEHHEQPDELTNVLEICNIVFTSMFAMEMILKITAFGCFNYLRNPYNIFDGIIVIISVCE
IVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSI
LGMHIFGCKFSLKTDAGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPLA
ALYFVALMTFGNYVLFNLLVAILVEGFQAEGDASRSYSDDDEGSSSNGSQQHKDSLTVSD
PKLPSLTPNGHLELEPLAEEKTRTSFSEENHRRRTICLGRRSSSLRHSRSSNYHHWGRPP
AQPSWSRRCSWNSAGRSASGLRAGGGIGGSLRVRSVHSHPAEHESLLPHPPFLSRRDRRA
VSLELPEILQRPALVRKKSVSAEHQDCNGKGPGPQGPLLGEVYPQLNARKDKKNLEEDTE
YSLCFRIQKMMEVYRPDWCEKREDWSIYLFSPQNKFRLMCQTIIAHKLFDYVVLAFIFLN
CITVALERPRIHQGSLERVFLTISNYVFTAIFVAEMTVKVVSKGLYLGDRAYLRSSWNVL
DGFLVFVSLIDIVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKP
IGNIVLICCAFFIIFGILGVQLFKGKFYYCVGLDVKNVTNKSDCLSANYRWVHHKYNFDN
LGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPVINHNPWMLLYFISFLLIVSFFVLNM
FVGVVVENFHKCRQHQEVEEARRREEKRLKRLEKRRRKAQRLPYYASYGRVRLMIHSFCT
SHYLDLFITLIICINVITMSLEHYSQPQSLETALKYCNYFFSSTFVVEATLKLVAFGFRR
FFKDRWNQLDLAIVLLSVMGITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGM
RALLDTVVQALPQVGNLGLLFVLLFFIYAALGVELFGELVCNVEYPCEGMSRHATFENFG
MAFLTLFQVSTGDNWNGIMKDTLRECPPGDSYSCNSSLQIISPMYFVSFVLTAQFVLINV
VVAVLMKHLDDSNKEAQEDAEMDAEIEMELAQGGLCCLGRLDRLAGADGSERAAGSCGNR
HAATAAVHTSQSGHTPRRTAPDTLQQRRLYSPAQENQWLESVSLLMKDSLDGEMQMIDNL
SGSVYHHYCSPPIRRDGRSQSGEIRLAEVEQTSLMSEQLSDKSSSPALPDDISLDDRSVY
QLLDRDCKEEQGSGDLSTEEVVSRSVLLQSEASSPGRDRQEVRRETGHRLQSPAHAGDVS
GGDSQTSSPLFHLPAEFFHPTTAAIPQGSPATGAAQPGSRHASPASWASLRSPGANSRVM
CSQTSHSNSSLATGSSVGSLQTTLEEGVSPPGDPTLPLICRTHIPPPELTQRPHTSQTAL
NLQATRGQQRSQGKYSDCTSPNWIRQDSAEPSDEDMGVSPGGLGQAGNPEQLSDNLSSFS
LTSLHPPDSLAPPLAKKCNSTGSLVQGSLAVQNKDGRCFYGFNPWTEATNEETEREASPV
GAKTCSQTVGSSCRKNR
NT seq
5994 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatcctgctgaactgtgtgacgctgggaatgtaccagccctgcgagaacatc
gactgctcctccgatcgctgccagatcctgcaggcctttgacgccttcatctacatcttc
tttgcgctggagatggtggtgaagatggtggctctggggatcttcggccggcgctgttat
atgggcgacacctggaacagactggacttcttcatcgtgatggccggggtggtggagtat
tctctggacctgcagaacatcaacctgacggccatccggacggtgagagtcctgcggccg
ctcaaagccatcaacagagtccccagcatgaggatcctggtgaatctgctgttggacaca
ctgccgatgttggggaatgtgctgctgctctgcttcttcgtcttcttcatcttcggcatc
atcggcgtgcagctgtgggcggggcttctgcgcaaccgctgctacccggaggagaacttc
accctcttaacaggtgtggcacttcctgctccgtactactctcccaatgaggacgacgag
aggcccttcatctgctctctgccgcaggataacgggatcatgtcgtgcggtgacgtgccg
gcgcggcgtgtggcgggacatcagtgctgtctggacgtggatgatctcctacaccatcag
gctctgggcctcgtgaccgagcccttcctcaacgccagcgccttcgtacccgggctctgc
gtgaactggaaccggtactacacccgctgccacactggacacagaaacccgcacaaagga
gccatcaactttgacaacatcggatacgcctggatcgttatttttcaggttattactctg
gagggctgggtggaaatcatgtattacgtcatggatgctcactcattctacaacttcatc
tattttattctgctgattatagtgggctctttcttcatgataaacctgtgtttggtcgtc
atagcgactcagttttcggagaccaaacagcgcgagcatcagctgatgcaggagcagcga
gccgcctgtctgtcctccagcacactggcctcgctgtccgaacccggcgactgctacgag
gagatcttccagctcgtctgccacgtcctccgcaaagcgcgccgacgcaccgctgcgttc
ttcagaacgctctgctgcaaaccaccggagcagacgcacgagaaaacaaacgccaacgga
ggagaaaagagcctccaacaacatgatggagccacacctgccgcatcagcagccaatcag
gagacagaggaggacacagcagaagagacagacaggtgtcagagagagaagggggcgtgt
cgggagcggagccgagagctgtggatggagatgagggtcaaactgtggggcatcgtggag
agtaaatacttcaacagaggaatcatggtggccatcctcatcaacaccatcagcatgggc
atagagcaccatgagcagccagatgagctcactaatgttctggagatctgtaacatcgtc
ttcaccagcatgtttgctatggagatgatcctcaagatcacagcgttcggctgctttaat
tacctgcgcaatccgtataacatctttgatggaatcatcgttatcatcagtgtgtgtgag
attgtcggtcagtctgacggcggcctgtcggtgctccggacgttccggttgctgcgggtt
ttgaagctggttcggttcatgccggcgctgcgcagacagctggtggttctcatgaagact
atggacaatgtggccacattctgcatgctgctgatgctcttcatcttcatcttcagtatt
ctggggatgcatattttcggctgtaagttcagtctgaagaccgacgctggagacacagtc
ccagacaggaagaactttgactctctgctgtgggcgatcgtcactgtttttcagatcctg
acccaggaggactggaacgtagtcctgtataacggcatggcctccacgtctcctctggcc
gctctgtattttgtggctctgatgacgttcgggaactacgtgctgttcaacctgctggtg
gccattctggtggagggctttcaggctgagggtgatgccagccgctcgtactctgatgat
gatgagggatcttcttctaatggaagccaacagcacaaagactcactcacggtctccgat
ccgaagctgccctctctcactcctaatgggcatctggagctggagccgctggccgaggag
aagaccaggaccagcttctctgaggaaaaccaccggaggaggacaatctgcctgggcagg
agatcctcatctctacgccacagccgcagttccaattaccaccactgggggcgtcctccc
gctcagccgtcctggagccgccggtgtagctggaacagtgcgggccgttctgccagtggc
ctgagggctggagggggcatcgggggcagtttacgggtccgcagtgttcactcgcacccc
gcagaacatgagtctctcctgccccacccacccttcctgtcgcgcagagaccgccgcgct
gtctcactggagctgcctgagatcctgcagcgccccgctctggtcaggaagaagagtgtg
tctgcagaacaccaggactgtaatgggaagggcccgggccctcaggggccgctgctggga
gaggtttatccccagctcaacgcacgcaaagacaagaaaaacctggaggaagacacagaa
tatagcctgtgtttccgtatccagaagatgatggaggtttatcgtccagactggtgtgag
aagagagaggattggtccatttacttattttccccccagaacaagtttcgtctgatgtgt
cagactatcatcgctcataagctctttgactacgtggttcttgccttcatcttcctcaac
tgcatcacagtggctctggagagacccagaatccatcagggcagtctggagcgagtcttc
ctcaccatctccaactatgttttcactgccatctttgtggccgagatgactgtcaaggtg
gtgtctaagggtctgtatctgggcgatcgagcgtatctgcgcagcagctggaacgttctg
gacgggtttctcgtcttcgtgtctctgattgacatcgtggtgtcgatggcgggtggagcc
aagatcttgggcgtgctgcgggtgctccgcctactgaggacgttacgcccactcagggtg
atcagtcgagctccgggtctgaagctggtggtggagactctgatcacgtcactgaagccc
atcgggaacatcgtcctcatctgctgcgctttcttcatcatcttcggcatcctgggagtt
cagctcttcaaagggaagttctattactgtgtgggtttggatgtgaaaaacgtcaccaat
aaatccgactgtctgtctgccaattaccgctgggttcatcacaagtacaactttgacaat
ctggggcaggctctgatgtcactgtttgtgttggcgtctaaagatggatgggtaaatatc
atgtaccacgggctggatgctgtcgggatcgaccagcagcccgtcatcaatcacaacccc
tggatgctgctctacttcatctccttcctgctgatcgtcagtttcttcgtgttgaacatg
tttgtcggcgtggtggtggagaacttccacaagtgccgtcagcatcaggaggtggaggag
gcgcggcggcgggaggagaagcggctgaagcgcttggagaagaggagacgcaaggcccag
cggctgccgtattacgcctcgtacggccgcgttcgcctgatgattcactcgttctgcacc
agtcactatctggacctcttcatcaccctcatcatctgcatcaatgtgatcaccatgagc
ctggagcactacagccaaccacagtcgttggagacggcgctgaaatactgcaactacttc
ttcagctccacgtttgtggtggaggccacgctgaagctggtcgcgttcggcttcagacgc
ttctttaaagacagatggaaccagttggatctggcgatcgtcctgttgtctgtgatggga
atcactctggaggagatcgagataaacgcttcacttcccatcaatcccaccatcatccgc
atcatgagggtcctgcgtatcgcccgcgttctgaaattgctaaagatggccacaggaatg
agagcgctgctcgataccgtggtgcaggctttaccacaggtggggaatctgggtttgctc
ttcgttctgctgttcttcatttacgcggcgctcggagtcgagctgtttggagaactggtg
tgtaacgttgaatacccgtgtgaagggatgagccgacacgccacgtttgaaaacttcggc
atggcgttcctcaccctcttccaggtttctacaggagacaactggaacggcatcatgaag
gacacgctgcgcgagtgtccgccgggcgacagctactcgtgtaactccagcctgcagatc
atctcgcccatgtacttcgtgagcttcgtgctgacggctcagttcgtcctgattaacgtg
gtggtggccgtgctgatgaaacacctggacgactccaataaggaagcgcaggaggacgcg
gagatggacgcggagatcgagatggagctggcgcagggcgggctgtgctgcctgggccgt
ctggaccgcctcgccggggccgatgggagcgagagggccgcggggagctgcgggaacaga
cacgcggccacggctgcggttcacacgagccagagcggacacacgccgcgcagaaccgcg
ccggacacactccagcagaggagactctactccccggcacaggagaaccagtggctggag
agcgtctctctgctgatgaaggactctctggatggagaaatgcagatgattgacaatctg
tcaggatcagtgtaccatcattactgctctccaccaatcagacgagacggcaggagccaa
tcaggagagatccggctggcagaggtcgagcaaacgtctctgatgtcggagcagctgtca
gataaatcctcatcaccggcgctgcctgatgacatcagcctggatgaccgcagcgtgtac
cagctgctggacagagactgtaaggaggagcagggcagcggtgacctgagcacagaagag
gtcgtgagcagaagcgttctccttcagagcgaggcatccagcccaggaagagacagacag
gaagtgcggcgtgagacgggtcatcggctccagtctccagctcatgccggagatgttagt
ggaggagacagccagacatcttcacctctctttcatctcccagcggagttcttccacccc
accaccgctgcgatcccccagggcagcccagccaccggagcggcccagccgggctccaga
catgcatctccagcctcgtgggcttctcttaggtccccaggggccaacagcagggtcatg
tgctcacagacatcccacagtaactcctctctggccacgggcagttccgtgggcagcctg
cagaccacgctggaggagggcgtctccccgccaggagatccgacgctgcctttaatctgc
agaacccacattccccctccagaactcacacagagacctcatacttcacagactgcgctc
aacctccaggccaccagggggcagcagaggagtcagggcaaatacagtgactgcacaagc
cctaactggatccgacaggactccgcagaaccctccgacgaggacatgggagttagtcct
ggaggactcggtcaggccggtaatcctgaacagttgtcggataacctgagtagcttctct
ctgacctctctgcacccgcccgactcgctggcgccgccgctggccaagaagtgcaacagc
actgggagcttagtacaggggagcctagccgtccagaataaagatgggaggtgcttttac
ggattcaacccctggactgaagcgacaaatgaggaaacggagagggaggcgtcacccgtt
ggtgccaagacgtgcagccagactgtgggttccagctgccgtaagaacagatga
DBGET
integrated database retrieval system
