Megalobrama amblycephala (Wuchang bream): 125274480
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Entry
125274480 CDS
T08212
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03030
DNA replication
mamb03410
Base excision repair
mamb03420
Nucleotide excision repair
mamb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125274480 (rfc4)
03410 Base excision repair
125274480 (rfc4)
03420 Nucleotide excision repair
125274480 (rfc4)
03430 Mismatch repair
125274480 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamb03032
]
125274480 (rfc4)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125274480 (rfc4)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125274480 (rfc4)
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125274480 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
125274480 (rfc4)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125274480 (rfc4)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125274480 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
125274480 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
Mg_chelatase
AAA_24
AAA_14
SLFN-g3_helicase
DUF815
AAA_28
AAA_5
RuvB_N
AAA_19
Cdc6_lid
ResIII
Gp44_lid
AAA_7
Kinesin
Motif
Other DBs
NCBI-GeneID:
125274480
NCBI-ProteinID:
XP_048056872
LinkDB
All DBs
Position
LG8:36249768..36256211
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGTSQSVKAQKPSSSLSSSGGEKKQRAVPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKN
FAQLTVAGSRTDGKPCPPFKIIILDEADSMTNAAQAALRRTMEKESRTTRFCLICNYVSR
IIEPLTSRCSKFRFKPLANDIQQERLLEICGKENLKYSKDGIEALVKVSEGDLRKAITYL
QSAARLNAEREITEQIIIEIAGVVPPKVIETLLQTCYRGAFEKLELAVKDLIDQGYAANN
VLNQLHDVIIEEKLSDKQKSVIAEKMAEVDKCLSDGADEYLQLLSLCSVIMQQAAQNT
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttttgaaaggaacttcacagagtgttaaagctcagaaaccatcatcatca
ttatcatcatcaggtggagagaagaagcagagagcagtgccctgggtggagaaatacaga
ccaaagtgtgtggatgaagtggcttttcaggaagaggtggttgcagtactgaagaaatct
ctagagggcgctgatctgcccaacctgctgttctatggacctcctggaacaggaaagacg
tccaccatcctcgcggccgccagagagctttatggacctgagctgtaccgacagagagtt
ctggagctcaacgcgtctgatgaacgagggattcaggtggtccgtgagaaggtgaagaac
tttgcccagctgacggtggccggctcgcgaacagatgggaagccttgtccgccgtttaag
atcatcatcctggacgaggcggattcaatgaccaacgccgctcaggcggcgctcagacgc
acaatggagaaagagtctcgaaccactcgattctgtctcatctgcaactacgtcagccgg
atcattgagccgttgacctccagatgctccaagttccgcttcaaaccgctggccaatgac
attcagcaggagcgtctgctggagatctgtgggaaggagaacctcaagtacagcaaagat
ggaatcgaggctctggtgaaagtgtcagaaggagatctccggaaagccatcacgtatctc
cagagcgccgcgagactcaacgctgagcgggaaattactgaacaaatcatcatcgagatc
gccggggtggttccacccaaagtgattgaaacgctcctccagacgtgttacagaggtgct
tttgaaaagctggagctcgctgtgaaggatctgatcgatcagggatacgctgcaaacaat
gttctcaaccagttacatgacgtcatcatcgaagaaaagctgagcgataaacagaagtct
gtcattgcagagaagatggccgaggtggataagtgtctgtcagacggcgcagacgagtat
ctgcagttattgagtctgtgttctgtcatcatgcagcaggccgcacagaacacttga
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integrated database retrieval system
