Megalobrama amblycephala (Wuchang bream): 125274759
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Entry
125274759 CDS
T08212
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125274759 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mamb01007
]
125274759 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamb03016
]
125274759 (vars2)
Enzymes [BR:
mamb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
125274759 (vars2)
Amino acid related enzymes [BR:
mamb01007
]
Aminoacyl-tRNA synthetase
Class I (U)
125274759 (vars2)
Transfer RNA biogenesis [BR:
mamb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125274759 (vars2)
Prokaryotic type
125274759 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
125274759
NCBI-ProteinID:
XP_048057162
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All DBs
Position
LG9:complement(2996864..3025328)
Genome browser
AA seq
1080 aa
AA seq
DB search
MLKRSRFQDMWKCVHVVSPRIWSRDLQRAWSTWGCRLCSQTPSNTQPSHHPRTQAEKAKR
RRAREKAILSSDVNDVGLSWSDKEKITYNATLLPGEKKDTTLPFPQSYSPEYVEFGWYQW
WEKQGFFSPEQHSKQPHSVDKYFSLCIPPPNVTGTLHLGHALTVAIEDAFARWRRMQGYK
VLWVPGCDHAGIATQSVVERKLLREQGKCRQDYSREEFLKQVWRWKNEKGDEIYHQLRKL
GASLDWSRACFTMDPGFSSAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSKQ
LSGRTLLSVPGYQQKVEFGIMVTFAYPLEEQEGEVAVSTTRPETMLGDVAIAVHPDDPRY
KDLHGKHCRHPFTKRLLPIVTDSMVDMTFGTGAVKLTPAHDHTDFLLSQRLSLPRLTVIG
GDGTMTSVCGQWLEGVKRFDAREQVITALMERKLFRGKKDHPMSLPICSRSGDVIEPLLK
KQWFVRCQEMGKKAIQAVEEGDLQIIPHFYSKMWKSWLSNISDWCISRQLWWGHQIPAYR
VTLQNSKDTEEEQWVWGRSAAEARQRAAVKFGVNPDAVTLTQDPDVLDTWFSSGLFPFAM
LGWPQQTEDLKQFYPNSILETGSDLIFFWVARMVMLGRELTGQLPFKQVLFHSLVRDKYG
RKMSKSLGNVIDPLDVISGISLERLQEKVREGNLDPRESVVAMEAQKKDFPKGIPECGTD
ALRFALCSYKAQGEDISLSVSHVLSCRHFCNKMWQAVRFTLTTLHDASLPTSLAETYPLS
SMDRWICSRLYSTVQQCERGFESFELHTVTSALHSFWLHSLCDVYLESIKPVLKCEGSDS
EEQRVRERQVATSVLYHSVSISLALLSPFMPFLTEEMWQRLLPYGDSNRTSTSLCVQPYP
KTSQLEHWYFPKEEADFSLVQEVVRVARLLRAQCQMTKERPDLWAVCGQDQAKTLLHFRS
AICTLGRISALHLHCPEGGITDSPPPKTSAVGVVDHSIRLHLSVQNGINADKQRAILSQR
KEKLASKLKQALARTYVPNYTEKVPDKVRQETENKITAMEQELKNIEDQLLALEEIRKEV
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgctccagatttcaggacatgtggaagtgtgtgcatgtggtgtcacccaga
atctggagcagagatctacagagggcctggagcacatggggatgcagactctgctctcaa
accccatctaacacacagccttcacatcatcccaggacacaagccgagaaagccaaacgc
agacgagcacgggagaaggccatactcagtagtgatgtgaatgatgttggactgagctgg
tcagataaagagaaaataacctacaatgctacactcttacctggagagaagaaagacacc
actctgccattcccacagtcctacagcccagaatatgtggagtttggctggtatcaatgg
tgggagaaacagggattcttcagtcctgagcagcatagtaaacagccccattctgttgat
aaatatttctccttatgtattccaccgccaaatgtgaccggcactttacatcttggacat
gcactgacagtggctatagaagatgcttttgctcgctggcgacggatgcagggctacaag
gtgctgtgggttccaggctgtgaccatgctgggattgcaacacagtctgtggtggaaagg
aagctgttgagggaacaggggaagtgcagacaggactacagcagagaggagttcctcaaa
caggtctggagatggaaaaatgaaaagggagatgagatttatcatcagctgagaaaactg
ggtgcatctcttgactggagcagagcctgctttacgatggacccgggtttcagcagtgct
gtgactgaggcctttgtcaggttgtgtgactctgggctcatctatcgctctgaaggtctg
gtcaactggagctgtgcattagagtcagccatctcagatatagaggtggactcaaaacag
ctgtctggcaggactcttctgtctgttcctggttatcagcagaaagtagagtttgggatc
atggttacatttgcatatcctttggaggaacaagaaggagaggttgccgtttcaaccact
cgtccagagacgatgctgggagacgtggccattgctgttcatcctgatgatcctcgatat
aaagatcttcatggcaaacactgcagacatccattcacaaagcggttattacctattgtc
actgactctatggtggatatgacatttggcacaggtgctgttaaattgacaccagctcat
gatcacactgacttcctactctctcagagactttcactcccacgcctcactgtgattgga
ggagatgggaccatgacctcagtctgtggccaatggctagagggtgttaaacgctttgat
gccagggaacaagtaatcactgcgctgatggaaaggaagctgttcagaggaaagaaggat
catcccatgtcattaccaatctgcagccgttctggagatgtcattgaaccgttgctgaag
aaacagtggtttgtacgctgtcaggaaatgggcaaaaaggcaattcaagcagtggaagaa
ggggatctacagataattcctcacttttattcaaaaatgtggaagagctggttgtccaac
atcagtgattggtgtatttccagacagctttggtggggtcatcagattccagcctatcga
gtgacactgcaaaactcaaaggacacagaagaggagcagtgggtctggggcaggagtgct
gcagaggctcgacaacgtgcggctgtgaagtttggagtgaatcctgatgcggtcacactc
acgcaggacccagatgtgctggatacttggttctcctctggtctctttccattcgcaatg
ctcggctggcctcagcagacagaggacctgaaacaattctaccccaattccattctggaa
acaggaagtgacctcatcttcttctgggtggccaggatggtgatgctaggcagagagttg
actggccagctgccctttaaacaggtgctctttcactctctggtgagagataaatatggg
cggaagatgagtaaatctttaggaaatgtcattgaccctcttgatgtcatctcagggatt
tctttggagagacttcaagagaaagtcagagaaggaaatttggatccgagagaaagcgtt
gttgccatggaagcacagaaaaaagatttccctaaagggattccagagtgcgggacagac
gctttgaggtttgcactctgctcttataaagcccagggagaggacatcagcctgtctgtg
tctcatgtgctgagctgtagacatttctgtaataagatgtggcaggcggtgcgcttcacc
ctcaccacgttgcatgatgcaagtttaccaacatcgttagcagagacctatcctttatcc
agcatggacaggtggatatgttcacgtctgtacagcactgttcagcagtgtgaacggggt
ttcgagagcttcgagctccacacggtcacatctgcactgcactctttctggctccacagt
ctgtgtgatgtctacctggaaagtatcaagccggtgttgaaatgtgaaggctctgatagc
gaggaacagagagttagagaaaggcaggtggccacgtctgtgttgtatcacagcgtgtcc
atctctctcgctctgctctcgccctttatgccgttcctcacagaggagatgtggcagaga
ctcctgccttacggtgactctaacaggacctctaccagcctgtgtgtgcagccctaccca
aagacctcacagctggagcactggtattttcctaaggaggaagcagacttctctttggta
caggaagttgtcagagtggcgaggttactgagggctcaatgccagatgacaaaggaaaga
cctgacttgtgggcagtttgtggacaagatcaggctaagactcttctgcacttcagatct
gctatctgcacgctgggccgaatctctgcacttcatctgcactgtccagagggaggaatc
actgactcccctccacctaaaaccagtgctgtaggggtggtggatcattccatccgcttg
catctgagtgttcagaatggtattaatgctgacaaacagagagctattctctctcagcgc
aaagaaaagctggcttccaaacttaagcaagccctcgctcggacctacgtgcccaactac
acagaaaaagtacctgataaagtcagacaagagacggagaataagatcacagctatggag
caggagctgaagaacattgaggaccaacttttggctttggaagaaataaggaaagaagtc
taa
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