Megalobrama amblycephala (Wuchang bream): 125274774
Help
Entry
125274774 CDS
T08212
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125274774 (irx1b)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125274774 (irx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
125274774
NCBI-ProteinID:
XP_048057186
LinkDB
All DBs
Position
LG9:complement(3396547..3399571)
Genome browser
AA seq
445 aa
AA seq
DB search
MSFPQLGYPQFLNASQEVYGAERTGVMPSSPREGSSENSANPATAAAAITPMLGMYANPW
TVQNYSAFLPYNSAELALLSQMGSQYELKDNPGAHPPGFAVHTAPGFYPYGQYQYGDPAR
AKSATRETTSTLKAWLQEHKKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
VTWGRSAEDRDGRIFDSDNEDDADKNDDEEEIDLETIDIDKAEEPRGDQNQETSDNQPER
ESVETPRILSSPALKNMDSPVSSSNKEQSVVKSVGEVSPGGPVCQRPGNSKPKIWSLAET
ATSPDNTQKLGVSSTPAGLRASPSTHPAFLSTNGIYTCQIGKLHNWASAAFLSANSLMGV
RSLLSHNSNFPNHSPVTNPEKKPSSASGSPCLDSDNSSDSFSLKHNDQENVQRIESPTLA
SRPPFPVIHDRSHHETSQRALKTIS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccccagctgggttacccacagttcctaaacgcttcccaagaggtgtacgga
gctgagcgcacgggtgtcatgccgtcatctccacgcgagggaagctcggagaacagcgca
aatcccgcgactgcagcagctgctatcacgccaatgctcggcatgtacgcgaatccgtgg
accgtgcaaaactatagcgcctttttaccttacaacagtgccgagctggccctgctgtct
cagatggggtcgcagtatgagttgaaggataaccccggggctcacccaccaggatttgca
gtccacacagcgcccggtttttacccatacggccagtaccagtacggagatccggcccgg
gccaaaagcgctaccagagagacaaccagcacactgaaagcatggcttcaggaacataaa
aagaacccttacccaaccaagggtgagaagatcatgctggccatcatcactaagatgacc
ctcacgcaggtgtccacctggttcgcgaacgcgcgtcggagactcaagaaggagaataaa
gtgacctggggtcgcagtgccgaggacagagacggacgaattttcgatagcgacaatgag
gacgacgcggacaaaaatgacgacgaggaagaaatcgatctggagaccatcgatattgac
aaggctgaggagcccagaggagatcagaaccaggaaacctcggataatcaacccgagaga
gaaagcgtagaaacaccgcggatattatcctcaccggcacttaaaaacatggacagccct
gtgtcgagtagtaataaagaacaaagtgtggtcaaaagcgtcggtgaagtgtctcctggt
ggaccagtgtgtcagaggcctgggaacagcaaacccaaaatctggtctttggcggagacg
gcgacaagtcccgacaacacgcaaaaactcggtgtctcctcgacgcctgcaggcctcagg
gcctcaccctcgacccatccagctttcctctccactaacggaatttatacttgccagatt
gggaaactacacaactgggcgagcgcagctttcctcagtgcaaattctctgatgggggtg
cgctcacttttgagtcataacagtaacttcccaaaccacagccccgttacgaaccccgaa
aagaaaccctcgtctgcctctgggtctccatgtctagacagcgataactcatccgacagt
ttcagtctcaaacataatgatcaagagaacgttcagagaattgaatctccaacacttgcg
tccagaccaccgtttccagtcatccatgacaggtctcatcatgaaacatcacaacgcgct
ctgaagactatttcatga
DBGET
integrated database retrieval system
