Megalobrama amblycephala (Wuchang bream): 125274787
Help
Entry
125274787 CDS
T08212
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
mamb03083
Polycomb repressive complex
mamb04110
Cell cycle
mamb04330
Notch signaling pathway
mamb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125274787 (hdac1)
03083 Polycomb repressive complex
125274787 (hdac1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125274787 (hdac1)
04350 TGF-beta signaling pathway
125274787 (hdac1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125274787 (hdac1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125274787 (hdac1)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125274787 (hdac1)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
125274787 (hdac1)
HDAC complexes
Sin3A-HDAC complex
125274787 (hdac1)
BRAF-HDAC complex
125274787 (hdac1)
REST complex
125274787 (hdac1)
SHIP complex
125274787 (hdac1)
MiDAC complex
125274787 (hdac1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
125274787 (hdac1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125274787 (hdac1)
Chromatin remodeling factors
NuRD complex
125274787 (hdac1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
125274787
NCBI-ProteinID:
XP_048057206
LinkDB
All DBs
Position
LG9:4365114..4373685
Genome browser
AA seq
484 aa
AA seq
DB search
MALSSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPDKRISIRAHDKRIACDEEF
SDSEDEGQGGRRNAANYKKPKRVKTEEEKDGEEKKGEPTDVKEEEKASEEKMDTKGPKEE
LKTV
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgagttctcaaggaacaaagaagaaagtttgctattattatgacggagatgtt
gggaattactactatggccagggtcatccgatgaaaccccacagaatccggatgacccac
aacctcctgctcaactatgggctgtataggaaaatggaaatttatcggcctcataaggcc
aatgctgaagaaatgaccaagtaccacagtgacgactacatcaagttccttcgttccatc
cgcccagacaacatgtctgagtacagcaagcagatgcagagatttaacgtaggggaggat
tgtcctgtctttgacggcttatttgagttctgtcagctctcaacaggtggatctgttgct
ggggctgtgaaactcaacaaacagcagacagacattgccattaactgggcaggtggcctt
catcatgccaagaaatctgaggcatctggattctgctatgtcaacgacatcgtactggcc
attctggaactgctcaaataccatcaaagagtgctttacattgacattgacattcatcac
ggtgatggagttgaggaagccttctacacaactgaccgtgtcatgactgtgtccttccac
aaatatggagagtatttccctggtactggagacctcagagatattggtgcagggaaggga
aaatactacgctgtaaattacccgctcagggatggtatcgatgatgaatcctacgaagcc
atattcaaacctatcatggccaaagtgatggagatgtaccagcccagtgctgtggtgctc
cagtgcggcgctgactctctgtctggagatagattgggctgctttaacctcaccatcaaa
ggtcatgctaagtgtgtggagtacatgaagagcttcaacctgcccctgctcatgctggga
ggtggaggctacaccatcaggaacgtggcccgctgctggacctatgagacggctgtagcg
ctggacagcactattcccaatgagctcccgtacaatgactactttgagtattttggacct
gatttcaagctccacatcagcccctccaacatgaccaatcagaatacaaatgactacctg
gaaaagatcaaacagcggttgtttgagaatctgcggatgttgcctcatgccccaggggtt
cagatgcaggcgatcccagaggatgctgttcaggaagacagtggagatgaggaggacgac
cctgacaaacgcatctccatccgtgcccatgacaagcggatagcctgtgatgaggagttc
tcagactctgaggacgaaggacagggcggccggagaaatgcagccaattacaagaagcct
aaacgagtgaagaccgaagaagagaaggatggagaagagaagaaaggtgagccaacagat
gttaaagaagaagagaaagcttcagaagaaaaaatggacacaaaggggccaaaagaagaa
ttaaaaacagtctga
DBGET
integrated database retrieval system
