Megalobrama amblycephala (Wuchang bream): 125274814
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Entry
125274814 CDS
T08212
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
mamb03083
Polycomb repressive complex
mamb04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125274814 (rbbp4)
03083 Polycomb repressive complex
125274814 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
125274814 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125274814 (rbbp4)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
125274814 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
125274814 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
125274814 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
125274814 (rbbp4)
PRC2.2
125274814 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
125274814 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
125274814 (rbbp4)
Chromatin remodeling factors
NuRD complex
125274814 (rbbp4)
NuRF complex
125274814 (rbbp4)
NuRF complex (fruit fly)
125274814 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
125274814
NCBI-ProteinID:
XP_048057257
LinkDB
All DBs
Position
LG9:complement(5171272..5180267)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaagaagctgcctttgatgacgcggtggaggagagggtgataaatgaagaa
tataaaatatggaagaaaaacactccgtttctttatgatctggttatgactcacgcgctg
gagtggcccagtcttactgctcagtggttgccagatgtcaccagacctgaagggaaggat
tttagtgtgcaccgcctggttcttggcacacatacctctgatgagcagaatcacctggtt
attgccagcgtccaactgcccaatgatgatgcccagtttgatgcctcgcattatgacagt
gaaaaaggggaatttggtggttttggctcagtgagtgggaagatagagattgagatcaag
attaatcatgagggagaggtgaacagggctcgctacatgccacagaacccctgcatcatt
gccaccaagactcccactagtgatgtgctggtctttgactacaccaaacacccctccaaa
cctgatccctctggcgagtgcactcctgacctgcgtctgagggggcatcagaaagaaggt
tatggtctgtcctggaatcccaacttgagtggctgtctgctgagtgcgtctgatgatcac
accatctgtctgtgggacatcagcacagtgccaaaggaggggaaaatagtggatgctaaa
accattttcactggtcacactgctgtagtggaggacgtgtcttggcacctgctgcacgag
tctctctttgggtctgttgcagatgaccagaagcttatgatctgggacacacggtccaat
aacacatccaaacccagtcatgcggtagatgcccacactgcagaggtcaactgtttgtcc
ttcaacccatacagcgagttcattctggccaccggttcagctgacaaaactgttgcattg
tgggatctgcgaaacctcaagctgaaacttcactcatttgagtcgcacaaagatgaaatt
ttccaggttcagtggtcacctcataatgagaccatcctggcctccagtggaacagaccgg
agactcaatgtttgggatctcagtaaaatcggtgaggaacagtcaccagaagatgcggag
gatggacctccagagctgctgtttatccatggaggccatacagccaagatctcagacttc
tcctggaatccaaatgaaccatgggtgatttgctcagtgtctgaggacaacatcatgcaa
gtctggcagatggcggagaacatctacaatgacgaggacccagagggggcagcagacact
gaggttcagggataa
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