Megalobrama amblycephala (Wuchang bream): 125274833
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Entry
125274833 CDS
T08212
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125274833 (tdp2b)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
125274833 (tdp2b)
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GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
Exo_endo_phos2
UBA_8
TAP_C
Motif
Other DBs
NCBI-GeneID:
125274833
NCBI-ProteinID:
XP_048057271
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Position
LG9:complement(5520915..5528245)
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AA seq
391 aa
AA seq
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MSSTVMSGNHEDQQMSALEETRTSLCDEFASISGSDSAVAQYYLAENEWDMERALNSFFE
AHMDSVFDVEDAEETKDVSGNKRKGMNSSDTADTSGTKKKFKTDKVDCIDLTAEEPTCSS
SVTVNVKNSQAESAVTESDAEDGKFSIISWNVDGLDTLSLAERARGLCSYLVLYTPDVVF
LQELIPSYIQYLKKRAVSYLFVEGSDDGYFTAIMLKKSRIKLLESEIICYPTTQMLRNLL
VAQVTFSGQKLYLMTSHLESCKNQSEERMKQLRVIFQKMKEAPEDSTVIFAGDTNLRDTE
VVQVGGLPPGVCDVWEQLGKQEHCRYTWDTKANSNKTVPYISRCRFDRIFLRSAKTGPGV
TPDHMVLVGMEKLDCGRYTSDHWGIYCTFNT
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcactgttatgtcagggaaccacgaggatcaacaaatgtctgctttagaggaa
acgaggacgagtctttgcgacgagtttgcctctatctctggatcggacagtgccgtggcc
cagtattatttagcagaaaatgaatgggacatggagagagcattgaactctttctttgaa
gctcatatggactcagtctttgatgttgaagacgcagaggaaactaaagatgtgtctggg
aataagagaaaggggatgaactcttctgacactgctgatacttcaggaacaaagaagaaa
tttaagacggacaaggtggattgcattgacttgacagcagaggaacccacttgctccagc
agcgtgactgtgaatgtgaagaacagtcaggctgaaagtgccgtaaccgaatctgatgca
gaggacggcaagttctcaatcatcagctggaatgtggatggtttggacacattaagtctt
gcagagcgtgccaggggcttgtgctcatatctagttctatatacaccagatgtggttttt
cttcaagaactcattccatcttatattcagtatcttaagaaacgtgctgtcagctacctg
tttgttgaagggagcgatgatggttacttcacggcaataatgttgaagaaatcaagaata
aaacttttggaaagtgagatcatctgttatcctacgacacaaatgttgagaaatctgtta
gttgctcaggtgactttctcaggtcaaaagctgtacttgatgacatcacatttagagagc
tgtaagaaccaatcagaggagagaatgaaacaactgcgggtcatatttcaaaagatgaag
gaagcaccagaagattccactgtcatttttgccggagacaccaatctcagagacactgag
gtggtacaggttggaggtttgcctccaggtgtgtgcgacgtgtgggaacagctgggcaaa
caggaacactgccgatacacttgggacaccaaagcaaacagcaataagactgtgccttac
atcagcagatgtcgcttcgaccgcatcttccttaggtctgctaaaactggcccaggagtc
actcctgaccacatggtcttggttggaatggagaaactagactgtggccgttataccagt
gatcactggggaatttactgcactttcaacacatga
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