Megalobrama amblycephala (Wuchang bream): 125274974
Help
Entry
125274974 CDS
T08212
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125274974 (vps50)
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Others
EARP complex
125274974 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
125274974
NCBI-ProteinID:
XP_048057520
LinkDB
All DBs
Position
LG9:11296691..11466209
Genome browser
AA seq
988 aa
AA seq
DB search
MQKIKSLMSRQGLKSPQESVVDMSPVESFRSPSQEELRELREQPTDPLAEQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLNLLELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSAKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITTDSYIPCLTDLCKALWEVMLSYHLTMQWHDEHYKEEVTTPDDS
SAEGSDESTVDRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSIA
QLHEFKFMGQCRSPSVSPSRQPESTELVELSLFEQYLQGGNPFEMQIDNKEEETEDVLAS
NGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPVKSVSRETLRSRKRSDYNLNR
ANAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMHF
QSASLPSQGSQPGVSRQTIPDYWYESSGLGLISSRLRTTLSRIQESLIDVEAGGESAGPH
ASPEERKEKVPSPHLSQLVILTASDTLYGLAERVVATESLVFLAEQFEFLQPHLDTMMPS
AKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIKEIMSQHNIYV
DVLLKEFEKFNQRLGDVSKIVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNEGRAL
MQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQLTNLV
TVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctctgatgtcccgtcagggcctgaaaagtccccaggagagtgtg
gttgacatgagccccgtggagagcttcaggagccccagccaggaagagctgagggaactg
agggagcagcccaccgatccactggcagaacaggaaatcattgacagcatagaggaagtg
tacttctccagtgactcctttgacatggtgcaatacgagcttgagaaactccctccggat
ctgaaccttctggagcttgaggagtacagagataagctgaagagacaacaagcagctgta
tctaaaagagtggcagacctcattttggagaaacagccttcctatgttaaggagcttgag
agagtgacgtctctgcagaccaacctgcagctggctgcagtcatctgcactaacgcacga
aggcagcttcgttctgctaaagaaggcttcaccgaagcaagtcttgggctgttggccaat
cagagacgccggcagctgttgacaggattgctgaagtctttgaggaccataaagactctg
caaagaactgatgttcgactgagtgaaatgctggaggaggaggactatccaggcgccatc
cagctgtgtttagaatgccagaaggccgccagcacattcaaacactacaactgtataagc
gagttgaattccaaactgcaagacactctggagcaaatcgaggaacagctagatgtggcg
ctgtccaaaacctgcaagcactttgatgtttctcactacaccaaagttcaactggcatat
aagcttctaggcaagacacagacggccatggatcagctgcacatgcacttcactcaggcc
atccacaacactgtcttccaggtggtgctgggatatgtagagctgtgcgccggcaacgcc
gacaccaagttccagaagatgcagtacaaggacctttgcacgcacattaccacagacagc
tacatcccctgcttgaccgacctctgcaaggccttgtgggaggtgatgcttagttaccat
ctaaccatgcagtggcacgatgagcactacaaagaggaagtgacgactcctgatgattca
agcgcagagggctcagacgaatctactgtggaccgtagttatgtgaaaaagaagctggaa
catggcttaacgcggatctggcaggacgtccaattgaaagtgaaagcctatttgctggga
acagacatgtccaacttcaagtacgacgacttcattgtggttctggatgttatcagcagg
ttgatgcaggtaggagaggaattctgcggcagcaagtctgaggtgttgcaggagtccatt
aagagacaaagtgtgaactactttaagaactatcacagaactcgcttggaggagttgcga
atgttccttgaaaatgaaacctgggagttgtgccctgtgaagtccaacttcagtattgcc
cagctccacgagtttaagttcatgggtcagtgtcgttctccctcagtatctcccagcaga
cagccagaatccacagagctggtggagctttctctgtttgagcagtacctgcagggcgga
aatccttttgagatgcagattgacaacaaggaagaggagacagaggatgtcctggcttct
aatgggtatgagtcagatgagctggaaaagagtgtgtatcaggactacgacagtgacagt
gatgtacctgaggagctgaaacaagactatgtagatgagcagacaggagacgctccagtg
aagagcgtgtccagagagacacttcgcagccggaagaggtccgactacaatctgaaccga
gccaatgcccccatccttaccaacaccaccctcaacgtgattcgcctggtcgggaaatac
atgcagatgatgaacattctgaagcccatcgcctttgatgtcatccactgtgtgtctcaa
ctctttgattactatctgtatgccgtctacaccttctttggccgcaatgacatgcacttc
caatctgcatctctgccttcacaaggctctcaacctggtgtttccagacagacaatccct
gattattggtatgaatcatctgggctgggtttgatcagcagcagactgaggactacgctc
agccgaatccaggagagcctaatagacgtggaggctggaggggagagcgcaggtcctcat
gcatctcctgaggaaaggaaggagaaggtccccagtcctcatctcagtcagctggtgatc
ttgacggctagtgatacgctctatggcttggctgagagagtcgtcgccactgaatcacta
gtttttctggcagagcagtttgagttccttcagcctcatcttgacaccatgatgccttca
gccaagaagcccttcctccagcagttctactcacagaccgtatctacagccagcgagctc
cgcaaacccatttactggatcgtggcggccaaagccatagattacgaacagatgctgtta
ctgatggcgggagtgaaatgggacattaaagagataatgtcacagcacaacatctatgtg
gatgtccttttaaaggagtttgagaagttcaaccaaagactgggagatgtgtcgaaaata
gttcggattcctttgcctgtgtccaatgtcttatgggagcactgcatccgtctggccaac
aggacattagtggagggctatgctaatgtgaagaaatgcagtaatgaaggacgtgcactg
atgcagctggattttcagcagttcctgatgaagctggagaagctcactgacctcagacca
attccagacaaggagtttgtcgagacctacatcaaagcatactacctaactgagaacgac
atggagcagttcatcaagaaccacagggagtactcaatgaagcagctgactaacctggtc
accgtctgcctcgggtcccacatcaacaagaaagcacgacagaaactcctcgcagctatc
gatgacattgaccggccgaaaagataa
DBGET
integrated database retrieval system
