Megalobrama amblycephala (Wuchang bream): 125274987
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Entry
125274987 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 1 intermediate chain 1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04145
Phagosome
mamb04814
Motor proteins
mamb05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125274987
09142 Cell motility
04814 Motor proteins
125274987
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125274987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125274987
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125274987
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
125274987
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
125274987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_EML
WDR55
WD40_Prp19
Dynein_IC2
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
125274987
NCBI-ProteinID:
XP_048057547
LinkDB
All DBs
Position
LG9:11832725..11918346
Genome browser
AA seq
629 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEEKKKKESETQQKAEAAPEDSDLDRKRRETE
ALLQSIGISPEPPLVPTPMSPXKSMSTPSETGSQDSVDGAAAGRYRTLQWDTDPSVLQLQ
ADSELGRRTHRLGPSKITQVDFLPRELVSYCKETQTPLAAHQSEDEEEDEEVTEPKDGPE
TDLQEEEESKETKEGHPRELTEEEKQQVLHSEEFLIFFDRSIRVMERALAEDSNIFFDYS
GRDLEDKEGDLQGSSSLSLSRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPHE
PDGVALVWNMKFKKTTPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRT
PVQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELIYNK
SKPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAV
GPVDFSHLFITSSFDWTVKLWSTKQNKPLYSFEDNADYVYDVMWSPVHPSLFAAVDGMGR
LDLWNLNNDTEVPSASVTIEGAPALNRVRWAAGGKEVAVGDSEGRVWIYDVGELAVPHSE
DWTHFGRTLMEIRANRGDGEEEGPVELAT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagagtgacctaaaagccgaacttgagcgcaagaaacagcgccttgcacaa
atcagagaggaaaaaaagagaaaggaggaagaaaaaaagaagaaagagtcagagacacaa
cagaaagcggaagctgctcccgaggactcggatttggaccgcaagcgcagggagacggag
gccctcctccagagcattggaatctcacccgaacctccattagtgccgacaccaatgtcc
ccantcaagtctatgagcacccccagcgagacgggcagccaggactctgtggatggagca
gcagctggaagatataggaccttgcagtgggacactgacccctctgttcttcaactgcag
gctgactctgagctcggacgccgaacgcacagattgggaccttctaagataactcaggtg
gatttcctgcccagagagttggtgtcctactgtaaagagactcagacaccgctagcagct
catcagtctgaagatgaagaggaggatgaagaggtcacagaaccgaaagatggcccagaa
actgacctgcaggaggaggaagaaagcaaggaaacaaaagaaggccacccgcgggagctg
acggaggaagagaaacagcaggttctgcactcggaggagttcctcatcttctttgaccgc
agtattcgtgtgatggagagagctttagctgaggactccaacatcttcttcgactacagc
ggacgagacctggaggataaagagggagatctgcagggaagctccagtctctctctcagt
cgtctgttctatgatgagcactggtcaaagcatcgggtcatcacctgtctggactggtcc
cctcagtaccctgagctcttggtggcctcctacaacaacaatgaagacgctcctcacgag
ccagatggtgtggctttggtgtggaatatgaaattcaagaagaccacaccagagtacatc
taccactgccagtctccggtggtgtcggtgggttttgctcggtttcatcctaacctgttg
gtgggcggcacatactcgggtcagattgttctctgggacaacagaagtcaccgaagaacg
ccggttcagaggacgcccctgtccgctgcagcgcatacacacccagtgtactgcgtcaat
gtggtcggcacccagaacgccaacaacctgatcactgtgtccacggatggccggatgtgt
tcctggagcctggatatgctgtcacagcctcaggagagcatggagcttatttataacaag
tctaaaccagtggctgtgactgggatggcctttcccactggagacgtcaataattatata
gttggcagtgaggaggggacagtgtatacagcgtccagacatggcagtaaagctggcatc
tgtgagatgtttgagggccatcaggggccagtgacgggcatcagttgtcacagtgctgtg
ggccctgtcgatttctcccacctctttatcacctcttctttcgactggactgtaaaattg
tggagcacaaagcaaaacaagccgctctactcgttcgaggataatgcagactatgtctac
gatgtgatgtggtctcccgtgcacccctcgctcttcgccgccgtggacggcatggggcgt
ctggatctgtggaacttgaacaacgacaccgaggtgcccagcgctagtgtgacaatagag
ggagcccccgctctgaaccgcgtcagatgggccgctgggggcaaagaggtcgctgtggga
gactcggaggggcgtgtgtggatatacgacgttggagagctggccgtgccccacagtgag
gactggacccacttcggccgcacactgatggagatccgtgccaaccgcggggacggtgag
gaggaggggcctgtggaactggccacgtaa
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