KEGG   Megalobrama amblycephala (Wuchang bream): 125274991
Entry
125274991         CDS       T08212                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03050  Proteasome
mamb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    125274991 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    125274991 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mamb03019]
    125274991 (sem1)
   04131 Membrane trafficking [BR:mamb04131]
    125274991 (sem1)
   03051 Proteasome [BR:mamb03051]
    125274991 (sem1)
   03400 DNA repair and recombination proteins [BR:mamb03400]
    125274991 (sem1)
Messenger RNA biogenesis [BR:mamb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     125274991 (sem1)
Membrane trafficking [BR:mamb04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    125274991 (sem1)
Proteasome [BR:mamb03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     125274991 (sem1)
DNA repair and recombination proteins [BR:mamb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     125274991 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 125274991
NCBI-ProteinID: XP_048057554
LinkDB
Position
LG9:complement(11993942..11995756)
AA seq 70 aa
MSEKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagagaagaaacaaacagtggatttggggctgttggaggaagatgatgaatttgaa
gaattcccagcagaggactggacaggcctggatgaagatgaggatgctcatgtttgggaa
gataactgggatgatgacaatgtagaggatgacttttctaatcagctaagagcggagctt
gaaaaacacggatacaagatggaaacctcgtaa

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