Megalobrama amblycephala (Wuchang bream): 125275059
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Entry
125275059 CDS
T08212
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04514
Cell adhesion molecule (CAM) interaction
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125275059 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125275059 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mamb00535
]
125275059 (sdc3)
Proteoglycans [BR:
mamb00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
125275059 (sdc3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
SDH8
Motif
Other DBs
NCBI-GeneID:
125275059
NCBI-ProteinID:
XP_048057681
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Position
LG9:13163223..13203248
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AA seq
393 aa
AA seq
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MKLPCWMALALLLLAQTALASRPSDDEGSGDEFPDDEDFYSGSGSGFPDINVRPTAAGVA
VTTEEPLPLSTTQATGPAPSASPAAEPSSPPPPEVERESGLGQDVLDRDSKVETEIEEEE
MRTTKEPDRERESEMVIRLDADKERGQETTKATVAPRLTDVPVVFMDSSTAPDETTVEDD
DLFITTEMMFELSSTPETTTEEDIITTTEVIPTTVSSTTAKPPRPRPALTTPSSAPVRPR
QPQTTPSRAALPESSTRSLMSSTTQTQTPDETVNNEVAGPGPSGDFEIHENEVHQGNEVG
RGRKAGDADLTGNTVDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVY
RMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgtgctggatggcgctcgcgctgctgctgctggcgcagactgcactggca
tcccgaccaagcgacgatgagggctccggagatgaatttcccgacgatgaggacttctac
tccggatctggctctggctttccagatataaacgttcgtccgactgcagcaggtgtggct
gtcactacggaggagcccctcccactttctaccacacaggccactggccccgccccctcg
gcctcccccgccgcagagccgagtagcccacctccacctgaggtggagcgcgagagcggc
ttgggtcaagatgtactagacagagacagcaaagtggagactgagattgaggaggaggaa
atgaggacgacgaaggagccggatagagaacgagaatccgagatggtaataaggttggat
gctgacaaagagcggggacaagagacgacgaaagctacggttgcaccccggctgactgac
gttcctgtagtgttcatggactcatccaccgctccggatgagactacagtggaggacgac
gatctgttcattactacggaaatgatgtttgagctgtccagcacaccagagacgacgaca
gaagaagacatcatcacaaccaccgaggttattcccaccaccgtttcgtccaccactgct
aagccgccaagaccacgtcctgccctgaccactccaagctccgcccccgtacgaccccgg
caaccgcagaccaccccgagtagagccgccctgccggagagcagcactcgctcgctgatg
agctccacaacacagacacaaacaccagatgaaactgtaaataatgaagttgcaggacca
ggtccaagtggtgattttgaaatccacgagaatgaagttcaccaaggcaacgaggtcggc
cgaggcagaaaggctggagatgcagatctgactggaaacacagtagatgctgcgggaagc
tccgccgctcaacttccacagaagaacatcctcgagaggaaggaagttttgatagcggtg
attgtcggaggtgtagttggagcactcttcgctgcgttccttgtaatgttactcgtctac
cggatgaaaaagaaagatgaaggcagctacacattagaggagcctaaacaagccaccgtc
acctaccagaaaccggacaagcaggaagaattctacgcctaa
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