Megalobrama amblycephala (Wuchang bream): 125275176
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Entry
125275176 CDS
T08212
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125275176 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125275176 (ctdp1)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125275176 (ctdp1)
Protein phosphatases and associated proteins [BR:
mamb01009
]
HAD phosphatases
Fcp/Scp phosphatases
125275176 (ctdp1)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125275176 (ctdp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
Biotin_lipoyl
BRCT
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
125275176
NCBI-ProteinID:
XP_048057849
LinkDB
All DBs
Position
LG9:complement(16973931..17105697)
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AA seq
948 aa
AA seq
DB search
MEESVDSGGAAAEGPTVQVTEIRCPAGARPLRLLEWKVKPGALVNVDSVIAVCAPITAES
ESRGPERKLKSDRAGVVRELCCQLGQVIVPGGVIAKVEECSHPVVMKGLCAECGQDLTQL
QSKNGKQQVPFSTATVSMVHSVPELMVSSEQAEQLGREDQQRLHRNRKLVLMVDLDQTLI
HTTEQHCQRMSNKGIFHFQLGRGEPMLHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAH
TIAGFLDPEKKLFSHRIMSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNL
ITVKKYVYFQGTGDINAPPGSREAQMARKGSQAGRPAENLESSGQEEQRNGLRKSSKDRK
TGHEDSSSATTTQGALANERTQPTGESESRDLSDKSNAKMEGEGSSGVTCTSGETDIPNA
APDATANDLDFDLSSDSESEGKMGLSDSDGEGQPVDAGKPKQTKTEECKSKEVDGDGDIQ
RTEGDDVPETNPEGLSDLGNGCSDKKEVETESQNSEQSGVTMGEESLDHSMEDEDDEEEE
DIDQDDHLIYLEEVLVRIHSEYYSRYEAFLRKDRSESPDIRKIVPELKGRTLEGTTIVFS
GLYPTNYPMERTREWYHAKALGAKLCKTLVLNAKDPNRTTHLIAARAGTEKVRQAQGFKH
LYVVNPDWLWGCLERWERVEEQLFPLKDEYNKSHRSNSPAAFLDIQGSVPRPLFQAPPVQ
HKPLAPPEMRTYDPVTGKLIRRGPQASRPPSYLHSHGSSMSAKEDLSTLRLAQGSQQTVE
AAGSSPDDEQPGPSRRKRQPSMSETMPLYTLCKEDLDSMDKEVDDILGEESDNESDGKGK
EERMEAEEEDEEERPHTSKQKAPASDHVPSLAAVVEETAQTSTREDVCVTGNTYRGHKRK
LEEARDDNDNDDDDCGGSSKDSNEDEEGSSSEADEMAAALEAELNDFM
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtctgtagactccggtggtgcggcagcagagggccccacggtgcaggtgacg
gagatccgctgccctgcaggagcgcgtcccctgcgactgctcgagtggaaggtgaaaccc
ggagctttggtgaacgttgactctgtcatcgcagtatgtgcgccgataaccgccgaaagc
gagtcgagaggacccgagaggaagctgaagtcggaccgcgctggagttgtgcgggaactg
tgctgtcaactcgggcaagtcatcgtgcccgggggtgtgatcgcaaaagtggaagaatgc
agtcatcctgttgtaatgaagggcttgtgtgcagaatgtggccaggacttaactcaacta
cagagcaagaacggaaagcagcaggttcccttctccacagcgaccgtctccatggtgcac
agtgttcccgagctgatggtcagctcagagcaagcggagcagcttggccgagaggaccag
caaagacttcacaggaacaggaagttagtgctgatggtggatctggaccaaacgctgatc
cacaccactgaacagcactgccagcgcatgtccaacaagggaatctttcatttccagcta
ggacgaggggagcctatgcttcatacacgactgcgacctcactgcaaagactttctagaa
aagatcgccaaactctatgagctgcacgtcttcacctttggcagccggttatacgctcac
accattgcaggttttttagaccctgaaaagaaactcttctctcatcggatcatgtctaga
gatgaatgcatcgaccccttttctaaaacaggcaacctcagaaatttgttcccctgcgga
gactccatggtgtgcatcatagacgatagagaggatgtgtggaagttcgcccctaacctc
atcacagtgaagaaatacgtctacttccagggcaccggtgacatcaacgccccaccgggc
tcacgagaggcccagatggccagaaaaggtagccaggctgggcgacctgcagagaacttg
gaatcatcaggacaggaagaacagagaaacggcctcaggaaatccagcaaggacagaaaa
accgggcatgaggattcgtcctctgccaccaccactcagggagctttagccaatgagagg
actcagcccacaggggagagtgagagcagagatttaagtgacaagagtaatgcaaaaatg
gagggcgagggcagctcaggtgtcacatgtacctcaggtgagactgacatcccaaatgct
gctcctgatgccactgccaatgatctggattttgacctttcgagcgacagcgaaagtgag
ggtaaaatgggattatctgacagtgatggcgaaggacagccagtggatgctgggaaaccc
aaacaaacaaaaacagaggagtgtaaaagcaaagaggttgatggggatggggacatacag
aggacagagggtgatgatgtcccagaaacaaatcctgaaggtctctctgatttaggcaac
ggctgttccgacaagaaagaagttgaaacagagtctcaaaacagcgagcagtcaggtgtc
actatgggtgaggagtcattagatcatagtatggaggatgaggatgatgaagaagaggaa
gacattgaccaggacgaccacctcatttacttggaggaagttttggttcgcatccacagt
gagtattactcacgctatgaggccttccttaggaaagaccgttcagagagtccggacatt
cgaaaaattgttccagaactgaagggccgcacgctggagggcactacaattgttttcagt
ggcctgtatcccaccaactacccaatggagcgcacaagagagtggtatcatgccaaggcg
ctgggtgccaagctttgcaagaccctggtgctcaatgccaaagaccctaaccgcaccacc
caccttattgctgcacgtgcaggtacagagaaagttcgtcaagctcagggctttaaacat
ctttatgtggtgaatcctgattggttgtggggctgcttggagcgctgggagcgagtagag
gagcaactctttcctctcaaagatgaatataacaaatcacacaggagcaacagtcctgcc
gcatttctagatatccaggggtccgtcccaaggcctctcttccaggcccctcctgttcag
cacaagccccttgcaccaccagaaatgcggacctatgaccccgtcaccggcaaactgatc
cgccggggtccccaggcctcccgtccaccctcttatcttcattcgcatggatcgtccatg
tcggccaaggaagatctgtccacactcaggttagctcaggggtctcagcagacggtcgag
gctgcaggatcgagtcctgacgatgagcagcctggaccttcacgcagaaaacgacagccc
agcatgtctgaaaccatgccactctacacactctgcaaagaagatctggacagcatggac
aaagaggtggatgacatcctcggggaagagagtgacaatgaaagtgatggaaaaggaaaa
gaggagaggatggaggcagaggaggaggacgaggaagaaaggccccacacgagcaagcag
aaagccccagcatcagatcacgtcccgtcactggctgcagttgttgaagaaaccgcccaa
acgtcaaccagagaagacgtctgtgtaacagggaacacgtacaggggccacaaaagaaaa
ctggaagaggccagagatgataatgacaatgatgatgatgattgtggaggctccagtaaa
gactccaatgaggatgaggagggcagcagctcagaggctgatgagatggccgctgcgctg
gaggcagagctaaatgatttcatgtga
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