Megalobrama amblycephala (Wuchang bream): 125275291
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Entry
125275291 CDS
T08212
Symbol
cnot3b
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125275291 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125275291 (cnot3b)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125275291 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125275291 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
FlgM
Motif
Other DBs
NCBI-GeneID:
125275291
NCBI-ProteinID:
XP_048058069
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All DBs
Position
LG9:complement(22066138..22085931)
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AA seq
887 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWKKLHNAANANQKEKYESDLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKIVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKRMIERHRYHI
RMLETILRMLDNDSIQVDAIRKIKDDVEYYLDSSQDPDFEENEFIYDDLDLEEIPQPLGT
TSPQGHTEDEIFQHSSSTPTSTTSSSPIPPSPATCTTNSEDDKKRGRSTDSEICQSPIKN
GNPSSSLSSSSSLSSSSSSSGASSNSLISMATVASSGSSALGGSSLLGNMGGPLQNSGSY
SSATQQQTQQSQQQQHQPKNAVSSHTSTNSASSNNSILLPTSSSTSPPNTSTSCPLMPSS
QSQPSLGTGLSSSLGLGKGMSVTSTTNQMPGLVLSGMPASLSVTGFLSGSTPAPYAQAAA
SGCIGSGLSASIGTNISSTNSSGVITSVGTNGSLGSTSLLGSGSGVLGLGSTQSAVEPLP
LVAPSPVGGTLTSGSSVGVIGSNGGSSGTGNAVGSAALPRPPSGPKQNGGSSYSAVVADS
TSDSALNSASQSQNSQSSSLNSSTNQPKDSGSSLLGSMTLPPSSPSPSYSENKPCGGSLL
NGPHSYTQAADTIKPQEPLSSQKSIAERVAQGSGLEGELSALHISSGKYQQVLPLPASQS
ALSEVSXPPSLGVCPLGPVPLSKEQLYQQAMQESAWTHMPHPSDSERIRQYLMRNPCPTL
PFHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWF
QRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaagaaaacttcaaggcgaaatagacagatgtttgaaaaaggttgcagaa
ggggtagagcagtttgaggacatttggaaaaagctccacaatgcagccaacgccaaccaa
aaagaaaaatatgagtctgacctcaaaaaagagattaaaaaattacagcgccttcgtgac
cagattaagacatgggtcgcctccaatgagatcaaagacaaaagacagctagtagagaat
cgcaaactcattgagacgcaaatggagcggtttaagattgtggaacgggaaaccaaaaca
aaagcatactctaaagagggactcggccttgctcaaaaagtcgatcctgcacagaaagag
aaagaagaggtcgggcagtggctaacgaacacgatagacacgttgaacatgcaagtggat
cagtttgagagcgaggttgaatcgctttctgtccagaccaggaaaaagaaaggagataaa
gagaagcaggatcggatcgaggaactgaaacgaatgattgagaggcaccggtatcacatc
cgcatgctggaaaccatccttcgaatgctggacaatgactcaatacaggtggatgccatc
cgcaagattaaagatgacgttgagtactaccttgattcctctcaggatcctgactttgag
gaaaatgagttcatctatgatgaccttgatttagaggaaattccccagccactaggtacc
acatctccacaaggtcacacagaggacgagatcttccagcactccagttccacaccaacc
tccacaacgtcatcttctcccatacctccctctccggctacttgcactacgaattcggaa
gatgataagaaaagaggtcgctcgacagacagtgaaatctgtcagtctcctatcaagaat
ggaaatccatcttcatctctatcctcctcttcctcactgtcatcctcatcctcatcctcg
ggagcctcttcaaactctttaatctccatggctactgtcgccagcagtggaagctcggca
ttaggtggcagcagcctcttgggcaacatgggcggccccctccagaactctggcagctat
agttcagcaacacagcaacaaacacaacaatcccaacaacagcagcaccagcccaaaaac
gcagtctcctcccacactagcaccaactctgcctcctccaacaacagtatcttgctccca
acatccagctccacatcgccacccaacaccagcacatcgtgccccctgatgcccagctca
cagagccagccttcattgggaacgggtctttcctccagtctgggcctggggaagggtatg
tcggtgacgagtaccacgaaccagatgcccggtctggtcctttcagggatgccggcgtcc
ttgagcgtgactgggtttttgagcggatccaccccggcgccttacgcgcaagcggccgct
tcaggttgcataggcagcggactgtcggcatcgattggaacgaatattagcagtacaaac
tccagtggagtcataacctcagtggggactaacggaagtctaggctccacaagcctcttg
ggctcagggtctggtgttttgggtcttgggtctacacagtctgctgtggagcctttacct
ctggtggctcccagccctgtgggaggcacactgacctcagggagcagtgtgggagttatc
ggaagcaacggaggttcctctgggacaggaaatgcagtgggaagtgccgcgctaccacgg
ccacctagtggaccgaaacaaaacggtggttcaagttatagtgctgtggtagcagacagc
acgtcagactccgccctcaacagtgccagccaatcacagaacagccaatcctcatcctta
aattcctcaacaaatcagcctaaggacagtgggtccagccttctggggtcgatgacactg
ccgcccagctcgccctcaccatcgtacagtgagaataaaccatgcggtggcagcctgctg
aacggcccccactcatacacacaggctgccgacaccatcaagcctcaggagccactgagc
tctcaaaagtcgatagcagagagggtcgcccagggctcagggttagaaggagagctgtct
gcactacatatctctagtggtaagtatcagcaagtactccctcttccagcttctcaatct
gctctgtcagaggtaagcnatcccccttcgttgggcgtgtgtccactgggccccgtcccc
ctctccaaagagcaactctaccagcaagccatgcaggagtctgcctggacgcacatgcct
cacccgtccgactctgagaggatcaggcagtacctgatgaggaacccctgcccaacactg
ccttttcaccaccaggtgccacctcctcactctgacactgtggagttctaccagagactg
tctacagagaccctcttcttcatcttttactacttagagggtacaaaagcgcagtatcta
gcagccaaggccttgaaaaaacagtcgtggaggttccacacaaagtacatgatgtggttc
cagaggcatgaggagcccaagaccatcactgatgagtttgagcaaggaacatatatttac
tttgactatgagaagtggggccagaggaaaaaggaaggatttacatttgagtacaggtac
ctcgaggaccgggacctgcaatga
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