Megalobrama amblycephala (Wuchang bream): 125275355
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Entry
125275355 CDS
T08212
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125275355 (vps52)
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Others
EARP complex
125275355 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
125275355 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
CoV_NSP7
MscS_porin
COG6_N
DUF4795
DUF1664
DUF3440
Rubis-subs-bind
Motif
Other DBs
NCBI-GeneID:
125275355
NCBI-ProteinID:
XP_048058154
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All DBs
Position
LG9:complement(23375000..23405203)
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AA seq
722 aa
AA seq
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MAEALITGAVHINTPADSASGAMAYLQHKKSDFDVVPPLNLGDLDITTDEFILDEVDIHI
QANLEDDLVKEALKTGVDLRQYSKQVETELQRIEQASIKDYIKESQNIASLHNQITACDS
ILERMEGMLSSFQSDLSSISSEIQTLQQQSVSMNMRLKNRQAVRSQLSQLVDELVVPSTM
ITVILDSPVTEQDFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKIKAVSKIREF
ILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYFSYFK
SYSGRLLKVQYEDVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGEVLSPAELEG
PILIPHAAQRGDSRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSIMGK
TLSMFLKNLSTYLSDCYDSIAVFLCIHIILRFRAITAKRNIPALDKYWEAVLELLWPRFE
LILEMNIQSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNTLLGQLQI
EVENFVLKMAAEFPSRKDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLLLARTQEFI
EEILSSPFGGMIAFVKESEALIEKGQLEKLKNDEARITQLVRGFSSTWKQSVEALSQDVM
RSFTNFKNGTSIIQGALTQLIQYYHGFHKVLSQPTFRSLAVRSELINLHHLMVEVKKHKP
NF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgctgatcactggagctgttcatataaacacacctgctgattccgcgagc
ggtgcgatggcgtatttacagcataagaagtcagactttgatgtggttcctccactgaat
ctgggtgatctggacatcaccacggatgagttcattctggatgaggttgacattcacatt
caagctaatctggaggatgatctggtgaaagaggcactcaagacgggtgtggatttgcgg
cagtactccaagcaggtggagacagagctgcagcgaattgaacaagcatcaatcaaagac
tatatcaaagagagtcagaatattgcctctttacacaaccagattacagcctgtgactca
atactagagcgtatggagggcatgttgagcagttttcagagcgacctgtcatccatcagc
agtgagattcagacactgcagcagcagtcagtcagtatgaacatgaggctgaagaaccgt
caggccgtccgcagtcagctcagccagctggttgatgaactggtcgttcccagcaccatg
attactgtgattctggacagtcctgtaacagagcaggattttttggagcaacttcacgag
ctcaataacaagatcaactttgctaaagagctcagcttcagagagaccctcgcctgctct
gatatacaggacatcgtagatcgtctcaaaattaaagctgtctcaaaaatccgtgagttc
atcctacagaagatctactcattcagaaagccaatgaccaactaccagatccctcagaac
acactactaaagtacagatttttctatcagttcctgctagccaatgagagaacagttgca
aaggagatccgggacgagtatgtggacaccatgagcaaaatctacttcagttacttcaag
tcatacagcggcagactgctcaaagtccagtacgaagacgttgcagacaaggatgatctg
atgggagtagaggacacagccaaaaaaggttttttctccaagccttctctcaagagtagg
aacactatttttactcttggccagaggggggaagtactgagccctgcagagctggagggg
cccatactgatcccacacgccgcccagagaggagactccagatacccgtatgaaactctc
ttccgcagtcagcactatgctttgttggataatggctgtcgagagttcctcttcttgtct
gacttcttcatggtggcgggaaattctgcgttggatttattcaacagcattatgggaaaa
acgctcagcatgttcctgaagaatctgtcaacatacttgtcagactgctatgacagtatt
gccgtgtttctctgcattcacatcattctgcgcttcagagccatcacggccaagaggaac
atccctgcgcttgacaagtactgggaggctgtgctagaattgttgtggccaagatttgag
ctcattttggagatgaacatccagagcattcgaaacactgaccctcagaaactaggtgta
ctggacaccagaccacactatatcacacgccggtatgctgaattctcctctgctattgtc
agcataaatcaaacctttcccaacgagaggaccaacacactactcggacagctgcagatt
gaggtggagaattttgtgctgaaaatggcggctgagtttccttctaggaaagaccagctc
atcttcctcataaacaactatgacatgatgcttagtgtgctcatggagagagcagctgat
gacagtaaagaggttgagggctttcagcagctcctactggctagaacacaggagtttata
gaggagattctttcatctccgtttggagggatgattgcatttgtgaaggagagcgaggca
ctaatagagaaagggcaacttgaaaaactcaaaaatgatgaagctcgtatcactcagttg
gtgcggggtttctccagcacatggaagcagtctgtggaggccctgagtcaggatgtgatg
cgttcattcaccaactttaaaaatggaaccagcataattcagggagcattgacccagctc
atccagtactatcatggtttccataaggtcctctcccagccaacattccgcagtctggca
gtgcgctctgagctcataaacctccatcatctgatggtggaagtcaagaaacacaaacca
aacttttga
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