Megalobrama amblycephala (Wuchang bream): 125275441
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Entry
125275441 CDS
T08212
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
mamb04148
Efferocytosis
mamb04218
Cellular senescence
mamb04310
Wnt signaling pathway
mamb04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125275441 (nfatc1)
04310 Wnt signaling pathway
125275441 (nfatc1)
04020 Calcium signaling pathway
125275441 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125275441 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
125275441 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125275441 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125275441 (nfatc1)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
125275441 (nfatc1)
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Motif
Other DBs
NCBI-GeneID:
125275441
NCBI-ProteinID:
XP_048058332
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Position
LG9:25747485..25798310
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AA seq
869 aa
AA seq
DB search
MKSAEEDAYGYGQNTSISLPLSNPCPASQYHNLQTSPSLSISISQPSSFSPQDDMSSVGY
FQTSGPRSNGAPTLESPRIEITAYGQFPEDEVEENSVPVAKRVNSIVTLTLPSVDGYRDP
TCLSPASSVSSRSCHSDASSYESGFSYNYDNSPQNSPWQSPCVSPKGSSSLQSCTLGASP
RHSPSGSPRASITDDSWMGTRGSRPNSPCGGKRKYSFNGGQSHKYHPYSPNQSPGPSPQT
SPRLSVTEDTWLPNTNQYTNSAIVAAINALTTDGLTDLGEGIPLKSRKTSLEHSASMNLK
VEPGGEETGSLELCQEDFSARLPFKKETYCSGFLDVPQHPYWSKPKPYISPSLPALDWQL
PSSSGPYSLQIDVQPKSHHRAHYETEGSRGAVKALAGGHPIVQLHGYMESEPLTLQLFIG
TADDRLLRPHAFYQVHRITGKTVSTPSHEVMQSNTKVLEIPLLPESNMRAIIDCAGILKL
RNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTVSLQVASNPIECSQRSAQELPLVD
KQSMESCAASGGEQMLLSGHNFQPDSKVVFVERAQDGHHIWEMEAKVNRESSKSVALLVE
VPSYRNQRISNPVQVNFYVCNGKRKRSQYQRFTYLPTNVPTIKTEPRDDYDLPQVCAPLH
PVGLALHPKPYYSPPAMTPMMPSELRPCVAGSFASSPQRLAAKPTSLSCSSSPSTSPKLQ
DLSPPHISTKCLSAGSNLGPQSPTIPHVSTIQPTPGRYPQSILYPTGSAASSPGSHPSTP
NSAPELPFTPSHSLTQSQATSEASVLAAQITKGPVRSGSSPLLQEEEDAPAMLAVSIKQE
PQELDQMYLDDVNEIIRNDLSSISVHSHA
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggcagaggaagatgcatatggttacggccaaaacaccagcatttcacttcct
ctgagcaacccctgcccagcctcccagtaccacaacctccagaccagcccttcattgtca
atatctatcagtcagccatcctcgttctcccctcaagatgacatgagctcagtgggctac
ttccaaacatctggtccccggtccaatggagctcccacattggagagtccacgcattgag
ataacggcttacgggcagttccccgaggatgaagtagaggagaacagcgttcccgtggcc
aagcgagtcaattccatagtgacattaacattgccaagtgtcgacggttatcgtgatccc
acctgtctcagcccggcaagcagcgtgtcctctcgtagctgccattcggatgcgtcgtca
tacgaatctggcttctcgtacaactacgacaactcaccgcagaactcgccctggcagtct
ccctgcgtctccccgaaaggttcctcatcgctgcagtcctgcaccctcggagcttctccg
cgccattcaccatccggttccccccgtgccagtatcacagacgacagctggatgggcacc
agaggctcgcgaccaaattccccttgtggcggtaaacggaagtacagctttaatggtggc
caatcacacaagtaccatccatactcgccgaatcaatccccggggccatcgccacaaact
tcgccccgtctcagcgtgactgaggacacctggctgcccaataccaatcagtacaccaac
tctgccattgtcgccgccattaatgccctcaccacagatggattaacagatcttggggag
gggatccctttgaagtcccgcaagaccagtctggagcacagtgcctccatgaacctgaaa
gtagaaccaggtggagaggagacaggatccctggagctttgccaggaggacttctcagca
cgcttgcccttcaaaaaagagacctactgtagtggcttcttggatgtaccccaacaccca
tactggtccaagccgaagccttacatcagtccatcgttgcctgctcttgattggcagttg
ccttccagttcagggccgtacagcctacagattgatgtccaacccaagtcccatcaccgt
gctcattatgagactgaaggcagcagaggggccgtgaaagcactagcgggagggcatcca
attgtccagcttcacggctacatggagagtgagcctttgaccctacagctgttcattggg
acggcagacgaccgtcttctccggcctcacgccttctaccaggtccaccgtataaccggg
aagacggtgtccacaccaagccacgaggtcatgcagtccaacaccaaagttcttgagatt
cctctactgcccgagagcaacatgagggccataatcgactgcgctggaattcttaagctg
cgtaactcagacatcgagctgcggaagggcgagacagacatcggacggaagaacacgcgt
gtgaggatggtgttccgtgtccacatcaaccaacctaatgggaggacggtgtccttacag
gtggcatctaaccccattgagtgctctcagcgctcagcacaggagctgcccctcgtggat
aaacagagcatggaaagctgtgccgcctcagggggggaacagatgcttctcagcgggcac
aacttccagcctgactccaaggtggtgtttgtggagagagcacaagatggccatcacata
tgggaaatggaggccaaagtcaacagagaatcctccaaatctgtggctttgcttgtggaa
gtcccatcatatcggaaccaaagaatatccaacccagttcaagtgaatttctatgtgtgc
aatggcaaaaggaagagaagccagtaccagcgtttcacatacctgcccacaaacgttcca
accataaaaacagagccgcgcgacgactacgacctcccccaggtatgtgcgccactccat
cctgttgggttggcgctgcatccgaagccctactacagccccccggcgatgacccctatg
atgccctcagaactaaggccctgtgtggcaggctcattcgcatcgagccctcagagactc
gcggcaaagcccacctccctgtcctgctcgtcctcccctagcaccagccccaaactacag
gatctttccccacctcacatctccactaagtgcctatcagcgggatcgaacttgggcccc
cagtctcctacgatcccacacgtctccaccatccagcccacacccggacgctacccacag
tccatcctctacccaacaggcagcgccgcatcctctccagggtcccatccttccacccca
aactccgcaccagaactccccttcactcccagccacagtctgacccaatcacaggccacc
agtgaggcctctgtgttagcggctcagataaccaaaggaccggtgaggagcgggtcctcc
cccctcctacaggaggaggaagacgcccccgccatgctagctgtcagcatcaagcaggaa
ccacaggaactggatcaaatgtacctagatgatgtaaatgaaatcatcaggaacgatctc
tccagcatctccgtgcacagccatgcatag
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