Megalobrama amblycephala (Wuchang bream): 125275539
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Entry
125275539 CDS
T08212
Symbol
rnf115b
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125275539 (rnf115b)
04121 Ubiquitin system [BR:
mamb04121
]
125275539 (rnf115b)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125275539 (rnf115b)
Membrane trafficking [BR:
mamb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
125275539 (rnf115b)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125275539 (rnf115b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
Zn_ribbon_19
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
C1_2
Rad50_zn_hook
HypA
Motif
Other DBs
NCBI-GeneID:
125275539
NCBI-ProteinID:
XP_048058531
LinkDB
All DBs
Position
LG9:29264035..29277887
Genome browser
AA seq
305 aa
AA seq
DB search
MAEAAAAPQPRFFCHCCKGEIDPKLPEYVCPRCESGFIEEVSENSSLLLQSRDGAGSDDV
ASQFAELWQLLFMEHSALLSDPTVTDALRSRSGVEAAVGDPASGTAGPVASVETLLDCTE
PALHPPQNSQQRNSRLDQGQAVEGIVQQFLDGLFSSSDSAGSQTSSWSSMLHSNPGDYAW
GQGGLDVVITELLGQSENTGPPPAEKEMISSLPTVSISSEQAACRLECTVCREEYSVGES
VRQLPCLHYFHSNCIVPWLQLHDTCPVCRKSLDGEDRGFQPHTGPPPGVIPSSTNVEERS
TFETI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgctgctgctccacaaccccggttcttctgtcattgctgtaaaggtgaa
atcgaccccaagctgccggaatatgtttgtcccagatgtgaatctggcttcattgaagag
gtgtcagaaaactccagtcttcttcttcagagtcgtgatggggctggcagtgatgacgtg
gcctcacagtttgcagagctgtggcagctgctcttcatggaacattctgccctcctatcc
gaccccaccgtcacagatgcgctccgcagccgctctggggtcgaggcagcagttggtgat
cctgcctccgggacagcaggacctgtagcttccgtggagactttgttagactgcacagag
cctgcgctccaccctccacaaaacagccagcagcgaaactctagactggatcagggacag
gctgtggaggggattgtccagcagttcctggatggtctgttttccagttctgatagtgca
ggttcccaaacctcctcttggtctagcatgctacactctaaccctggagattatgcttgg
ggacaaggaggtttagatgtggtcatcacagagttgcttggtcagtctgaaaataccggc
ccccctcctgccgagaaggagatgatctcatctctccccactgttagcatctcttcagaa
caggctgcatgccgactggaatgcactgtgtgtagagaggaatactctgttggggaatct
gtccgacagctgccctgtctgcactactttcacagcaactgtattgtgccctggctacaa
ctgcatgacacctgccctgtctgccggaaaagtctagatggtgaagaccggggtttccag
ccccatacaggacctcctcctggggtaatcccctcatcgacaaatgtagaggaacgtagc
acctttgagactatttag
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