Megalobrama amblycephala (Wuchang bream): 125276042
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Entry
125276042 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mamb04054
]
125276042
Pattern recognition receptors [BR:
mamb04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125276042
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
125276042
NCBI-ProteinID:
XP_048059406
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All DBs
Position
LG9:43407857..43464848
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AA seq
1142 aa
AA seq
DB search
MPDSETRKRSSSPDSSCVSLKSDGSMDPPPVFSDGAVTSDPRWRKRSSSPDPSCVSLKSN
QSMDPPLKFSDGPVTSDPSIFRKRKRSSSPDPSCVSLKSDRSMDPPFNFSNGAVTSDPSR
GSQRATSPQPSCVSMNSSQSIVPPEFSDGPVTSDPRDDQTGDQDSPQAVDDELQRVKEQL
KTSMKNKYERLFEGLNLQENETLLNRIYTQLYIIEGESEGVNEQHEVFQMEKTARTQHSQ
DTPIDCNDIFKASPEPGREEKHQIKTVLTKGIAGIGKTVSVQKFILDWAEGKDNQDVDFM
FVLPFRELNLIRDHRYSLHRLLLDFHPELQDLDSKIYEECKVVFIFDGLDESRITLMFSD
AQKVSDVTETSSVGVLMSKLMTGELLPSALIWITSRPAAANQIPSKYINRLTEIQGFSEP
QKEEYFRKRISDEHQASRIISHIRRARSIHIMCHIPVFCWISSTVLQKLLKEDLSAEIPQ
TLTEMYIHFLLIQINMRNQKYEERDPEKLLLSNREVIVKLAEVAFKQLMKGNVMFYEEDL
RESGIDVTDASVYSGICTEIFKEESVIHQRKVYSFIHLSFQEFLAAFYLFYSHVIKNKKP
LDEFRFYRSDKVSLYDLLTSAVDKALMSRNGQLDLFLRFLLGVSLESNQRLLQDLLTHTE
NSSESIRGITQDIKKQIKGGHVLSTERSINLFLCLLEVKDQSLSREIQEFVKSDKHSEEK
LSPSHCSTISYMIQMSEEPLDELNPMKYNTSDEGRRRLIPAVINCRKALFSGSNLSDQHC
EIVSSVLQSSNSVLRELDLSNNDLQDSGVNFISDGLKSPNCQLQILRFVCCNLTAQHCEI
VSSVLQSSNSVLRELDLSNNDLQDSGVSFVSDGLKSPNCQLQILRLSGCMVTEEGCGYVS
SALSSNPSHLRELDLSYNSPGLSGVQLLNHKLEDPNYKLQILNLDHGGSVRITAGPRKYA
CDLTLDPNTANTRLVLSDGNRKVTRVKERQPYPDHPERFDHPQVLCRERLTGRCYWEAEW
SGDGAVISVTYEGITRKGLSEDCAFGFNNKSWSLSCSDGGFTVRHNKNRTDIPAVRSSSN
RVGVYVDVSAGSLSFYSVSRTLTRLHTLTRLHTFNTTFTEPLFAGFRVYYVSSSVSLCDI
KR
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgccagactctgagacgaggaagagatcttcatctccagattccagctgtgtgtctctg
aagagcgatggatccatggatcctcctcctgtattcagtgatggagcagtgacctctgac
cccaggtggaggaagagatcttcatctccagatcccagctgtgtgtctttgaagagcaat
caatccatggatcctcctcttaaattcagtgatggaccagtgacctctgaccccagtatc
ttcaggaagaggaagagatcttcatctccagatcccagctgtgtgtctctgaagagcgat
cgatccatggatcctccttttaacttcagtaatggagcagtgacctctgaccccagcagg
gggagtcagagagcaacatctccacaacccagttgtgtgtctatgaatagcagtcaatcc
atagttcctcctgaatttagtgatggaccagtgacctctgaccccagagatgatcagact
ggagaccaggattctcctcaagcagtagatgatgaactccagagagtcaaagagcagctc
aaaaccagcatgaagaacaagtatgagagattatttgagggactgaacctccaggagaat
gaaaccctcttgaacaggatctacacacagctctacatcatagagggagagagtgaagga
gtgaatgaacaacatgaggttttccagatggagaaaacagccagaacacaacactcacaa
gacactccaatcgactgcaatgacatctttaaagcctcacctgaaccaggacgtgaggag
aaacaccagatcaagactgttcttactaaaggcatcgctggaatcggaaaaaccgtctct
gtgcagaagttcattctggactgggccgagggaaaagacaatcaggatgtagatttcatg
tttgtgcttccatttcgagagctgaacttgatccgagatcatcggtacagtcttcacaga
cttctgctggactttcatcctgaacttcaagatctggactcaaagatttatgaggagtgt
aaagttgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttcagat
gctcagaaagtttctgatgtgactgagacttcatcagtgggtgtgttgatgtcaaagctc
atgacaggagagctgcttccctctgctctcatctggatcacctccagaccagcagcagcc
aatcagatcccctccaaatacatcaaccgtctgacagagattcagggattcagtgagcct
cagaaggaggaatatttcaggaagagaatcagtgacgagcatcaagccagcagaatcatc
tcacacatcagaagagcaagaagcatccacatcatgtgccacatacccgtcttctgctgg
atctcatccactgtgcttcagaagctcctgaaagaagatctgagtgcagaaatccctcaa
actctgactgaaatgtacatccacttcctgctgattcagatcaacatgaggaatcagaag
tatgaagagagagatccagagaaactcctgctgtccaacagagaagtgattgtgaaactt
gctgaagtggctttcaaacagctgatgaagggcaatgtgatgttctatgaggaggacctg
agagagagcggcatagacgtcactgacgcctcagtgtattctgggatttgcactgagatc
tttaaggaggaatctgtgattcatcagaggaaagtctacagcttcattcatctgagcttt
caagagtttctcgctgctttctatctgttttattcacatgtgatcaagaacaagaaacca
ctggatgagttcagattttacagatctgataaagtctctctgtatgatctactaacatca
gcagtagataaagccctcatgagtaggaatggacagctggatctgttcctgcggttcctg
ctgggcgtctcactggagtccaatcagagactcttacaggatctactgacacacactgag
aacagctccgagagcatcagaggaattacacaggacattaagaagcagattaaaggtgga
catgttctttccactgaaagatccatcaatctgttcctctgtctgctggaagtcaaagat
cagtctctgtccagagagattcaggagtttgtgaaatcagacaaacactcagaggagaaa
ctctctccgtctcactgctcaacaatctcctacatgatccagatgtcagaggaaccgctg
gatgagctgaaccccatgaaatacaacacatcagatgaggggagaagaagactgatacca
gctgtgatcaactgcagaaaagctctattttctggcagtaatctctcagatcagcattgt
gaaattgtgtcttcagttctacaatcctcaaactctgtcctgagagagctggatctgagt
aacaatgacctacaggactctggtgtcaacttcatttctgatggactgaagagtccaaac
tgtcagctgcagatcctgaggtttgtttgctgtaatctcactgctcagcattgtgaaatt
gtgtcttcagttctacaatcgtcaaactctgtcctgagagagctggatctgagtaacaat
gacctacaggactctggtgtcagcttcgtttctgatggactgaagagtccaaactgtcag
ctgcagatcctgaggttgtctggctgtatggtgacagaggaaggctgtggttatgtgtct
tcagctctgagttcaaacccctcacacctgagagagttggatctgagctacaatagccca
ggactgtcaggagtgcagctgctcaaccacaaactggaggatccaaactataaactgcag
atactcaacctggatcatggaggatcggtcaggattacagcaggaccacgaaagtatgcc
tgtgatctcacactggatccaaacacagcaaacactcgactcgttctgtctgatgggaac
aggaaggtgacgcgtgtgaaagagcgtcagccgtatcctgatcatccagagagatttgat
catcctcaggttctgtgtagagagagactgactggacgctgttactgggaggctgaatgg
agcggagatggtgctgtaatatcagtgacatatgaaggaatcaccaggaaaggattgagt
gaagactgtgcgtttggattcaataacaaatcctggagtctgtcctgctctgatggagga
ttcactgtccgtcacaataagaacaggactgatatacctgctgtccgttcatcctctaat
agagtaggagtgtatgtggacgtgtcggccggctctctgtccttctacagcgtctctcgc
acactcacacgcttacacacactcacacgcttacacacattcaacaccacattcactgaa
cccctctttgctggatttagggtttattatgtttcctcctcagtgtctctgtgtgatatt
aaacgatag
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