Megalobrama amblycephala (Wuchang bream): 125276088
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Entry
125276088 CDS
T08212
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125276088 (snx13)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
125276088 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
NCH1
Rep3_C
Motif
Other DBs
NCBI-GeneID:
125276088
NCBI-ProteinID:
XP_048059468
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Position
LG9:complement(38076320..38110348)
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AA seq
966 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFLISFGPFAIFYLAFYILCFIGGGFVVLLLFGKTNSEKHLE
RCEHSYLPSTQPAILKVSEEMKSESKPIKIDRRLTGSNIIDEPLQQVIQFALRDYIQYWY
YTLSDDETFLLEIRQTVQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQERLN
EREDPKQRDAPEELLDSFFEAEVEMERNICRDMVCMSRKDEEGYLRDLCEVLLYLLLPSG
DFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFLNILKLTDK
PPELEAVKDKVLEELQHLRSLDTGADDINIIKNQMNSLLFVKKVCETRIQRLQSGKEVDT
LKLAANFGKLCVIPLEHILVHNIALQFFMDYMQHMGGQAVLFFWLTVEGYRVTAQQQLEV
LQSSQRDGKKQSTQTTKGLLRAAAVGVYDQYLSEKASPRVQVDEASVTRLAQKLSKEDPT
PEIFDEIQRKVYDMMLKDERYYPSFRQHPLYVRMLAELDMLKEPSFRGSDDGDGESFNGS
PTGSINLSLDDLSSGSVDESAQLHAFISDTVDAFLNQLPMAGVCNDHGKTYALYTITVIR
KNSDGSEDIWKTYRRYSDFHDFHMRITEQFESLGPILKLPGKKTFNNMDREFLEKRKKDL
NSYLQLLLNPEMVKACPTLLPYVYDFLENKAYSKGKGEFARKMDTFVNPLRSSMRNVSNA
VKSLPDSLAEGVSKVSADVGQDFKKLGQDIKQSIFKVPPLLQKSDIDPEHCRVSAQLDDN
VDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIKATYGDTINRKIVDHVDYMTS
PEQVSDYVKRFRDSYWPNGILAETPPRRDKSLRMRTRVAAKTTLLGIMPDELKHIIGAET
TRKGILRVFDMFQHQSLNRRLVYVFLEGFLETLFPQYKFPELFVKLHSRSPRVLKYSQKM
RSLHKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagaggccagtctgtccatctggggatgggggggtctgggagtcgtcctcttc
ctcatctcatttggaccctttgccatcttttatctggccttctacatcctctgtttcatt
ggagggggttttgtagtgctgcttttatttggaaagacaaactcagagaagcacctggaa
aggtgcgaacactcctacctgccatctacacagccggccatactgaaggtttcggaagag
atgaaatcagagtccaaacccatcaagatcgaccgtcgtctgacaggatccaatatcata
gatgagccactgcagcaggtcatccagtttgctttgagggactatatccagtattggtac
tacacactgagtgatgatgaaacgttcctcttggagatccgtcagacagtccagaacgcc
ctcgtccagttctccaccaggtctaaagaggtggactggcagccgtatttcacaaccaga
ctggtggatgattttgcaactcatctgcgtgttttcaggaaagctcaagagaggctgaat
gagagagaagatcctaaacaacgtgatgctcctgaggagctgctggactcgttttttgag
gcggaggtagaaatggagaggaatatttgtagagacatggtgtgcatgtcacgcaaggat
gaagaaggttacctgcgggatctctgtgaggtgctgctgtacctgttactaccttctgga
gatttccacaacaagaatatgagatacttcctcagggaagttttggccagaggagtcctg
ctgcccttaattaaccagctcagtgaccctgattacatcaatcagttcgtcatctggatg
attcgtgactcaagctgtaactatgaggccttcttgaacatcttaaagctgacggacaaa
ccgcccgagctggaggccgtcaaagacaaagtcctagaggagcttcagcatctccgatct
ctggacacgggcgcagacgatatcaacataataaagaatcaaatgaatagtttgcttttt
gtgaagaaagtctgtgaaacacgaatacaaaggctacaatcaggaaaggaagttgacact
ttgaaactcgcagctaattttgggaagttgtgtgtgattccgttggaacatatcctagtg
cataacatcgcactgcagttcttcatggactacatgcagcacatgggcggtcaggcggtt
ctgttcttctggctgacggtggagggttatcgggtcacggcgcagcagcagttggaggtc
ttacagagcagccagagggatggaaaaaagcagagcacccagacaaccaaagggctgctg
agagctgctgcggtgggcgtctatgaccagtatctgtctgagaaggcctctccaagggtg
caggtggatgaagcgtctgttaccagactggctcaaaagctcagcaaagaggatcccacg
cctgagatatttgatgagatccagagaaaggtgtatgatatgatgttgaaggatgaacgg
tattacccgtcttttaggcagcacccgctgtatgtgcggatgctggccgagctggacatg
ctgaaggaacccagtttcaggggatctgatgacggggacggagagtcattcaacgggtct
ccaacaggaagcattaatttatcattagatgatctcagcagcgggagcgtggatgagtct
gctcagcttcatgcctttatctctgatacagttgatgcttttctaaaccaacttcctatg
gcaggcgtttgtaacgatcatgggaagacatacgccctttacaccatcaccgtcatacgc
aagaactccgacggcagtgaggacatttggaagacgtaccgtcgctacagcgattttcat
gacttccacatgcgcatcacggagcagtttgagagccttggtccgattctcaagcttcct
ggcaaaaagacctttaacaacatggacagggagtttttggagaaaaggaagaaggacctg
aactcatatttacagctgctgttgaatcctgagatggtgaaggcctgccccacgctgttg
ccctacgtctatgactttctggaaaacaaagcgtacagcaaaggcaaaggggaatttgca
cgcaagatggacacgtttgtgaatcctctccggagctccatgcggaatgtgtccaatgct
gtgaagtcactgccggacagcctggccgagggagtgtccaaagtctcggcggacgtgggc
caggattttaagaaacttggccaggatattaaacaatccatatttaaggtgcctccttta
ctccaaaagtctgacatcgatcccgaacactgccgtgtctcggcccagctggacgacaac
gtggatgataatattccactgagggtaatgttgctgttgatggacgaagtgtttgacctg
aaggagagaaatcagtggctgcggagaaacatcaaaaacctcctacagcagctcatcaaa
gcgacgtacggagacacgattaacaggaaaatcgtggatcacgtcgactacatgacctcg
cctgagcaagtgtctgattatgtgaagagattcagagactcttactggccgaacgggatt
ctcgccgagacgccgccccgcagagacaaaagcctccgcatgaggacgcgggtcgccgcc
aaaaccacactcctgggcatcatgccggatgagttgaagcacatcatcggggcggagacc
acgcgcaagggcatcctgcgtgtcttcgatatgttccagcaccaatctctgaaccggcgg
ctggtctacgtctttctggagggcttcctggagaccttgtttcctcagtacaagttcccc
gagctctttgtaaagctccactcgcgctcgccacgtgtactaaaatattcacaaaaaatg
cgcagcttgcacaagaggtga
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