Megalobrama amblycephala (Wuchang bream): 125276530
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Entry
125276530 CDS
T08212
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125276530 (npas4l)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125276530 (npas4l)
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Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
125276530
NCBI-ProteinID:
XP_048060037
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Position
LG10:5018576..5024379
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AA seq
591 aa
AA seq
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MFKMGFFALLQISVRMSVSCDTSIRRSLRASKRFRSTKGASKARRDHINAEIRTLRALLP
IDAEEQERLSYLHSMSLICTFIRKTVLLTGVHEDGSSVSPLNESFLQALPGFIVALTKDG
KLVYVSENVVEYLGLSMVDILQGDTFYDMMDSRDAEALKLVLRDPDVSAERSFVCRMLTS
KAFRLQYGSCCSMLVKGRFQSSSLFVALCTPTADRLQDRQLLHASGSFHTLHRPDMSLTH
APYSVLFHLGFSAEELIGRSWYDLLHPDDLTLAARCHTTLIRDEGDTSAEMLVRLQRKDL
SWIWLYICATTKAAKESIACKNHVISETEAIYLKDKLYGSVSPSVCGAQVSPGPVCLPET
AGQMPSRSRRSSETGDVQIRSFFSTPPYSPTSSHSSDFLSEGYGSFEHLVCGSRFCPSEA
FPVSQPYPDALPPVCLPDAHRVPVYQPVLDASEGPSDCVLHQEDFMFAQDSVSSLLTPEP
SPSADGHFLFSQTEQVEVGTLAHQIRSLASSFSRHTQPDGALCWTPEPLLDERVIDSILC
DLDAASAKNTDCVWNGLPVAPGGLSVEPFISATHTNTELHQLHHCLYAGIH
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaatgggcttttttgctttgcttcagatctcggtgaggatgagcgtcagctgc
gacacgagcatcagacggagcctccgcgcgtctaaacgcttcaggtccactaaaggggcg
tccaaagcccggcgagaccacatcaatgccgagatccggactttgcgggcgctgctgccc
atcgatgctgaagagcaggagcgtctgtcgtacctgcactccatgtcgctcatctgcacc
ttcatcaggaagactgtgttgctcacaggtgttcatgaggacggcagcagtgtttctcct
ctgaacgagagctttctgcaagccttgcctgggtttattgttgctttgaccaaagacgga
aaactggtgtacgtgtctgaaaacgtggtagaatatctcggcctgtcaatggtcgatatc
cttcagggagacactttctatgatatgatggacagtcgcgacgcagaagcgctgaagctc
gttttgagagatccggacgtctcagcagagaggagtttcgtgtgccgtatgctcacctcc
aaagccttccggctccagtacggcagctgctgctccatgctggtgaagggacgcttccag
agctcctctctgtttgtggcgctctgtacgcccacggccgacagactgcaggaccgccag
ctcctccacgcctccggctccttccacacgctccaccggcctgacatgagcctcactcac
gccccctacagtgttttgttccacctgggattctcagcagaggagctgattggtcgatcg
tggtacgacctcctgcaccctgatgacctcacgctcgccgcccgctgccacacgacactc
atacgagatgaaggcgacacaagtgcagagatgctggtcagacttcagcggaaggatctg
tcatggatctggctctacatttgtgcaactacgaaagcagccaaagaatcgatcgcctgc
aagaaccacgtcatcagtgaaacagaagccatctatctcaaagacaagctctacggcagc
gtgtctccgtctgtctgcggtgctcaggtgtctccgggtcccgtctgcttgccggagacg
gcaggacagatgccgagcagaagcaggaggagctcagagacgggcgatgtgcagatcaga
agcttcttctccacgccgccctacagccccacttcctctcactcctctgacttcctgtct
gaaggctatggctcttttgagcacttggtgtgcggctcacgcttctgcccatctgaagcg
ttcccagtgtctcagccgtaccctgacgctcttcctcccgtctgtctgcccgacgctcac
cgcgtccccgtgtaccagccggtgctggacgcgagcgagggcccgtcagactgcgtcctg
catcaggaggacttcatgtttgctcaggacagcgtgtcgagtctgctgacgccggagccc
tccccctcggcggacggacatttcctcttcagccagacggagcaggtggaggtcggaacg
ctggcccatcagatccgctctctggccagcagcttcagtcgacacacgcagcccgatggc
gccctctgctggacgcctgagccgctgctggacgagagagtcatcgacagcatcctgtgc
gatctggacgcggcctcggccaaaaacacagactgcgtgtggaacgggctcccggtggct
cccggcggcctctccgtggagccgttcatcagcgcgacacacaccaacactgagttgcat
caactccatcactgtctgtacgccggcatccattaa
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