Megalobrama amblycephala (Wuchang bream): 125276706
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Entry
125276706 CDS
T08212
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04141
Protein processing in endoplasmic reticulum
mamb04210
Apoptosis
mamb04217
Necroptosis
mamb04218
Cellular senescence
mamb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125276706 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125276706 (capn1a)
04217 Necroptosis
125276706 (capn1a)
04218 Cellular senescence
125276706 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125276706 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mamb01002
]
125276706 (capn1a)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
125276706 (capn1a)
Peptidases and inhibitors [BR:
mamb01002
]
Cysteine peptidases
Family C2: calpain family
125276706 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
125276706
NCBI-ProteinID:
XP_048060457
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All DBs
Position
LG10:complement(9930434..9945792)
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AA seq
704 aa
AA seq
DB search
MFTYGGISSQISANRLQAEGVGSFEQALHFQNQDFEALKQECLEGGYLFEDPCFPAEPPS
LGFKELAPYSSKTRDVEWMRPTELCDDPQFIVGGASRTDICQGALGDCWLLAAIASLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDIVIDDRLPVKDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELQNAPRDLYRIISKALDRGSL
LGCSIDITSAFDMESVTFKKLVKGHAYSVTALKQVEFRGRTERLIRIRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFSEFLRQFSRLEICNLSPDALSDDDLSHWN
TIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALMQKDRR
RYRRHGQDMHTIGFAIYEIPEEYAGCQNVHLKKDFFLTHSSSARSETFINLREVSTRLRL
PPGEYIIVPSTYEPSKEADFVLRVFTEKQSETEELDDEISADLEDEAEISEDDIDDSFKS
MFAQLAGEDMEISVRELRTILNRVVSKHKDLKTDGFSMESCRTMVNLLDKDGSARLGLVE
FQILWNKIRKFLGIFREFDIDKSGTMSSYEMRIAVESAGFKLNNRLNQILVARYAENEVI
DFDNFVCCLIKLEAMFRSFQQLDKDGTGTAEMNLSEWLFMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttcacatatggagggatctcatcacagatcagtgctaacaggctacaggcagaaggc
gtgggctcttttgagcaggctttacacttccagaaccaggattttgaggccctcaaacag
gagtgtttggaagggggctacctgtttgaagacccctgctttcctgccgaaccaccctct
ctcggcttcaaagaacttgccccgtattcctctaaaacccgtgatgtggagtggatgcgc
cctacagagctctgtgatgatcctcagttcattgtggggggagcttcacggacagacata
tgtcagggagctctgggtgactgctggctcctcgctgctatagcttcgctgactctaaat
gaaagactcctccacagggttgtacctcatggccagagctttcaggacgactatgctgga
atattccactttcagttctggcagtttggcgagtgggtcgacattgtgattgacgatcga
ctcccggtcaaagacggagagctcatgtttgtccattcagcagagggaaatgagttctgg
agtgccttagttgaaaaagcctatgcaaagcttaatggctcctatgaagctctctctgga
ggctccaccactgagggttttgaggatttcaccggaggggtctcagagatgtacgagctc
cagaatgctccaagagacctgtaccgaatcatcagcaaagccctggatagaggctccctg
ctgggctgctctattgatatcaccagtgcctttgacatggaatctgtaacgtttaagaag
ctggttaagggtcacgcttactcagtgactgctcttaaacaggtggaatttaggggccgt
acggagaggcttatccgtatccgtaacccgtggggtcaggtagaatggacgggggcctgg
agtgataactcccctgaatgggatgagattgatccatctgagaaggatgacttgcactta
caaatggaggatggagagttctggatgtcattcagtgagtttttgcggcagttctccagg
ctggagatttgtaatctgtcccctgatgctctgagtgatgatgacctgagccactggaac
accatcaagtttcacggtgcctggcggaggggcagtaccgcaggaggctgccgaaatcat
cccaacacattttggatcaatcctcagtataagatcacgctgctggaggaagatgatgac
ccggaggacgaagaagtggcctgcagcttcctggtggctttaatgcagaaagaccgcaga
cggtaccgccgccacggacaggacatgcacaccatcggttttgctatctacgagattcct
gaagagtatgcaggctgtcagaatgtgcatcttaaaaaggacttcttcctgacacactca
tcttccgcccgctctgagaccttcataaacctgcgggaggtgagcacccgtctccgcctc
cctcccggggaatacatcatcgtcccctccacctacgaacctagcaaagaggctgatttt
gtcctacgagtctttactgagaagcagtcagagacagaggagttggatgatgagatttca
gctgacctggaggatgaggcagaaatttcagaggatgacattgatgactctttcaagtcc
atgtttgcccagctggctggagaggatatggagatatctgtccgtgaactcaggactatt
ctcaacagagtagtgtccaaacacaaggatctaaagacggatggcttcagcatggagtcc
tgcagaactatggtcaaccttttggataaagatggtagtgcacgtttgggcttagtagag
tttcagatcctctggaacaagataaggaagtttctggggatcttcagagagtttgatatt
gataagtcgggaacaatgagttcttatgagatgcgtattgctgtagaatcagcaggcttt
aagctcaataacagactcaaccagatcctcgtagccagatatgctgaaaatgaggtcatc
gattttgataactttgtctgctgcttgatcaaactcgaggccatgttcagatcttttcag
cagttggacaaagatggaacaggaacggctgagatgaatttgtctgagtggctctttatg
accatgtgtggttga
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