Megalobrama amblycephala (Wuchang bream): 125276811
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Entry
125276811 CDS
T08212
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125276811 (zswim8)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
125276811 (zswim8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
125276811
NCBI-ProteinID:
XP_048060623
LinkDB
All DBs
Position
LG10:13906693..13946306
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AA seq
1952 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKE
ESHTGLKQHEDGQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEED
IRLYSCLANGSPDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFD
RCRITSCSCTCGAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYL
ISELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIK
KTLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFK
RRDSNAAPLLEILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASM
CDEMVVLWRLAVLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAV
ESCYFNWEVAYPLPGITYCSADKKNASFCWARAVQQQRGIKAGTSGESGEGARGGMSEGA
SSEHKSRSNSHLPQQEVAVRPKETIVSKRKGVSGVSSGGVLVCLGGRVSLSLQEGGKGMY
KASSSSPSAGSKAKLTQSNKSSCGSSSGVSGKHPGAKRRTSSEDSSLEPDMAELSLDDGS
SLALGAEACNTFDFLPPPPEMLPSPSPLLREPLKYSSGNISKERAFETKHVAHAAMPSAA
DAHACFSKENSIATPVVVAMEKEVEVEADLDETGGDEDPVDDTRPCASLPSKAQRGRREG
DGSGASGAPGPQVAEAAAGADAVGEDDYQAYYLSAASEEGADRGVADGNHEEEPDIFAGI
KPLEQEGRMEILFACAEALYAHGYSNDACRLAVDLARDLLANPPDLKVEQPQTKGKKSKV
STSKQTQVATNTLSKVAFLLTVLSERLELHNLAFNTGMFSLELQRPPASTKALEVKLAYQ
ESEVVALLKKIPLGLVEMTSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPT
GSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMIT
YKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVS
KHNPSATSAAVQGVTGGGAAGQQGGLAAGGVQNTATGEGISDSRDQEGAQSTSCEQQSEA
APFKPEGTVPSRLALGGRGAYGTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRR
PLRGGWTAASWGRGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPEC
HAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEI
GLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLAD
RASRARDPNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAK
GGGVYPEVLFEVAHQWYWLYEQTVGGGSGSQREGSGRCGANGGAGRTAPEGGCGILDNTG
ALDSTGVAAVTTTVTAAAVVPVISVGSTIYQSHALPGSAMAHTAGLHPYTTIQTHLPTVC
TPQYLGHPLQHVPRPAVFPVSGAAYPQVYDSRKTYQAGFKSICLSSQGMHPAFIGAQYPF
SVATGPHPPMAATAVTFPGVPVPSMTQIAVHPYHTAEAALPLSTTVAAGGVHSGSTIQAI
QGATLPGLSSQPASLVSAPFPVEDEQHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHND
HPNNFSRSPPYTEDVKWLLGLAARLGVNHVYQFCVGAAKGVLSPFVLQEIIMEALQRLNP
AHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYDDFVNIIRSARGAFCLTPVGM
MQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq
5859 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgctgagtgggaagacggagagaggttctcctttgaagattcggac
cgttttgaggaggactccctgtgctcattcatatcagaggcggaaagcctctgccagaac
tggagaggatggaggaaacagtctgccggcccaaattcacccactgtgaagattaaagaa
gaaagtcatacaggcttgaaacaacatgaggatggacaagtcatccctttggtggagctg
tcggccaagcaggtggcattccatattccgttcgaagtggtggaaaaggtctatcctccc
gttcctgagcagctccaattgcggatcgcctactggagctttccagagaacgaagaggat
atcagattatactcttgtttggccaatggcagccctgatgagttccagcgtggtgagcag
ctctatagagtgagagctgtgaaagaccctctgcagataggtttccaccttagtgccaca
gtagtgtcgccccaggccggccaatcaaaaggagcctacaatgtggctgtaatgtttgac
cgctgccgcatcacttcctgtagctgcacctgtggagcaggagccaaatggtgtgcccac
gttgtggccctctgcctcttcagaattcacaatgcttctgcagtttgtcttcgagcacct
gtgtcagagtccctgtccagattacagcgggatcaactccagaagtttgcacaatacctc
atcagtgaactcccacagcagatcttgccgacagctcagcgtcttttggatgagcttctt
tcctcccagtctacggctattaacaccgtgtgtggagccccggatcctactgctggccct
tcagcctctgaccagagcacctggtatctagatgagtccacgctcagtgacaacataaag
aagaccctgcacaagttctgtggcccctcaccagttgtgtttagtgatgtaaactccatg
tatctgtcgtccactgagcctccggcagctgctgaatgggcttgtttgctgaggccccta
cgaggtagagagccagagggcatctggaaccttctgtccatcgtcagagagatgtttaag
aggagagatagcaatgctgcgcctctgttagagatcctcactgaacagtgtctcacccac
gaacagatcattggttggtggtacagtgtgagaacatccgcctctcacagcagtgccagc
gggcacacaggtcgtagtaatgggcagacagaggttgcggcacatgcatgtgccagtatg
tgtgatgagatggttgtcttatggagactggcagtgctagaccctaccatgagtccccag
aggcgcttagagctcgcagcccagctgaagcagtggcacctgaaggtaatagagatcgtt
aaacgagggcagcatcggaagtctctggacaaactcttccagggcttcaaaccagctgtt
gagtcctgctactttaactgggaagtggcctaccctttacctggcatcacctattgcagt
gcagataagaaaaacgcctcattctgttgggccagggcagtgcagcagcagcggggcatt
aaagcagggaccagcggggaatcaggagaaggagctcgtggtggaatgtcagaaggtgct
tcttctgaacacaagtcaaggagcaactcccatcttccccagcaggaggtggctgtccgc
cctaaggagacaatcgtgagcaagaggaaaggagtgtctggcgtgagcagtggaggcgtg
ctggtttgtctgggtggcagggtctctctctcacttcaggaggggggtaaaggcatgtat
aaagccagcagctcctccccatcagctggtagtaaggccaagctaacgcagagcaacaag
agctcgtgtggaagttcgagtggcgtcagtgggaagcaccctggcgcaaagcgccgaacc
agtagtgaggacagctctctagagcctgacatggcagagcttagtctggatgatggctcc
agcctggcgctcggggcggaggcgtgcaacaccttcgatttccttcctcctcctcccgag
atgttgccttcacccagcccgctgctccgtgagccactcaaatacagcagcggtaacatt
tcaaaagagcgcgcctttgagacaaaacatgtggcacatgctgccatgccctctgctgct
gatgcccatgcctgcttttcaaaggagaactccattgcaactccagtagtggtagctatg
gagaaagaggtggaggtggaggcagacctggatgagaccggaggagacgaggaccccgta
gacgatactcggccctgtgcgtcactacccagcaaggctcagcggggccgcagagaggga
gatggaagtggggcttcaggggccccaggacctcaggtggctgaggcagcagcaggcgca
gatgctgtgggggaagatgactatcaagcctactatcttagcgctgcctcagaagagggg
gcggatagaggggttgcagatggcaaccatgaagaagagccagacatctttgctgggatt
aaacctctggagcaggagggcaggatggagatactgtttgcctgtgctgaggctctctac
gctcacggctacagtaatgacgcttgccgactggctgttgatcttgctcgagatcttctg
gctaatccacccgatctgaaggtggagcagccacagacaaagggtaaaaagagtaaggtg
tcaaccagtaaacagacacaggtggccactaacaccctgtctaaagtagcctttctgctg
actgtgttgagtgagaggctggagctccataacctggccttcaacactggcatgttctcc
ctagagcttcagagaccgccagcttctactaaagctctggaggtgaagctggcatatcag
gagtcagaggtggtggctctcctgaagaagattccactgggtcttgtagaaatgacctcc
ataagggacagagcggagcagcttcgtgatggaaacttctgtgactatcggccggttctg
cctctcatgctggcaagcttcatattcgacgtactctgcacccctgtggtctctcccacg
ggctctcgacctcctagccggaaccgtaacaatgaaatgcctggtgatgaggagctggga
tttgaggctgctgtagcagctcttggtatgaagacaacggtcagtgaggcagagcatcct
ttactatgtgaaggcacacggagagagaaaggagacttggctctagcactaatgatcacc
tataaagatgaccaaagcaagcttaaaaagattctggacaaactccttgaccgtgagagc
cagacccataagcctcagactctgagctcattttactctagcaaaccagctacaagcagc
caaaagagcccatccaaacacgccacccacggtgccagcggagccacggggggagtgtca
aagcacaacccttcagcaacatcagctgctgtgcagggtgtgaccggtgggggagcggcg
gggcagcagggaggtttagcggctggcggagttcagaacacagcaacgggagagggcatc
tctgacagcagagatcaagagggtgcacagtcgacctcctgtgagcagcagagcgaagct
gcacccttcaagcctgagggcaccgtgcccagtcgtctggcactggggggccgcggggca
tacggcacacgctgctggggatcacctgtacggcagaaaaagaaacacactggcatggca
agcattgacagtagcgctccagagaccacctcagacagctctcctactctcagtcgacgc
ccacttcgagggggttggacagctgcttcctgggggagaggccaggacagtgacagcatt
agcagctcttcctctgattcactgggctcatcttcatctagcggctcccgcagagctgga
ggaggagccagagccaagagtactgacaccagcaggtataaaggccgtcggcctgaatgt
catgctccacatgtgcccaaccagccatctgaggcagctgcccatttttactttgaattg
gccaagactgtgttgattaaagctggaggaaacagctccacctccattttcacgcaaccc
tctgccagtggaggtcaccaggggccccaccgcaacctgcatctgtgtgcctttgagatt
ggcctgtatgccctcggcctgcataattttgtgtctcctaactggctgtcaaggacgtac
tcttcacatgtatcctggataacaggccaggccatggagattgggagtgctgccctcaac
atcctggtggaatgctgggacgggcatctcacgcctccagaggtggcatcacttgcagac
cgcgcatcacgagcacgggatcccaacatggtgcgtgctgcggcagagctggccttgagc
tgccttccccacgctcatgccctcaaccccaacgagattcagagagctctggtgcaatgc
aaagagcaggataatgtgatgctggaaaaagcttgcatggcagttgaggaagctgcaaag
ggaggcggagtatatcctgaggtcttgttcgaggtggctcaccagtggtattggctgtac
gagcaaacagtgggtggtggttcggggtcccagcgagagggttccggccgctgcggggcc
aatggtggagcaggaagaacggcacccgagggaggctgcggtattctggataacaccgga
gccttggattcaactggtgtcgcagctgtaactacgacagtgacggcagccgctgtagta
cctgtcatttccgtcggctccaccatataccagtcacatgcgctgccaggctcagccatg
gcacacacggcaggcctgcatccctacaccaccatccaaacccatctgcccaccgtctgc
accccacagtacctgggccacccgcttcagcatgtcccccgtcctgctgtcttccccgtg
tctggggcggcctacccacaggtatatgactcgaggaagacgtatcaggctggttttaag
agcatctgtttgtcttctcagggaatgcaccctgcttttattggtgctcagtacccgttt
tctgtggccactggccctcatcctcctatggcagcgactgctgtcactttccctggcgtt
ccagtgccgtccatgactcagatcgctgtccacccataccatactgcagaggcagccctg
cctcttagcactactgtggcagcaggaggagtacactcaggctccaccatccaggccatt
cagggggctactcttccaggactctcatcccagcctgcctcactggtcagcgcaccattc
cctgtggaagacgagcagcacagtcaaccaatcagccagcagggcctgcactacctccac
tcggcctatagagtcggcatgctggccttggagatgttgggaaggagggcccacaacgat
catccgaacaacttttcccgtagccccccatacacagaagacgtcaaatggctgctggga
ctggctgcgcgtctcggtgtgaaccacgtgtaccagttttgtgtgggggcagccaaaggt
gttcttagtccgtttgtcctgcaggagatcattatggaggctctgcagaggttaaaccct
gcacatatccacgcacacctccgcactcctgccttccaccagctcgtgcagcgctgccag
caggcctacttacagtatatccaccacaggctgatccatctgactcccgcagactatgac
gactttgtgaacatcatccgaagtgcccgcggggcgttttgcctgacaccagttggcatg
atgcagttcaacgatgtgctgcagaacctgaagaggggcaaacagacaaaagaactatgg
cagcggatctcgttggagatggccaccttctcaccatga
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