Megalobrama amblycephala (Wuchang bream): 125276828
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Entry
125276828 CDS
T08212
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125276828
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
125276828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125276828
Transcription factors [BR:
mamb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125276828
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
125276828
NCBI-ProteinID:
XP_048060679
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All DBs
Position
LG10:14419137..14443185
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AA seq
909 aa
AA seq
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MAGALRMDDTQYPMKFDNEFMVDLPYLHEPFEVKHEPFVTETVHGPYLQIIEEPKQRGFR
FRYECEGPSHGGLPGASSERNRRTYPTVKVSNYVGHARVEVQLVTHTDPPRVHAHSLVGR
QCNDNGICSIDVGPNDLTAQFSNLGILHVTKRGVAEVLTKRLREEKRRTKEPGYKFSDAE
EQAITQEAKELGKNMDLNIVRLKFTAYLQDSNGSFTRALKPVVSNPIYDSKSPNASNLKI
SRMDKTSGSVLGGEEVFLLCDKVQKDDIDIRFYEEEDDSGWEAFGDFSPTDVHKQYAIVF
KTPPYRCTDISRPVTVFLQLKRKKGGDCSEPKQFTYIPHNQDKEEVQRKRMKALPQHYDN
WRGGPQGGAGAFGGPGSGTGGGGMGGGFQFNHPMDGSGFFIGGCGGFGGGAQMSGSTPQA
DGSQNQPTNKQTQSASQMQQQLIQIATVLQNRATSMAKGTARALLQYCSTGDVRPLLVLQ
RHLCGVQDENGDTPLHLAIIHQQPAVVQQLIQALNNTPQQKFVNKLNNLSQSPLHLAVIT
KQPKLVEVLMRTGADPSLQDREGRTALHLAAHTGDEAVLRVVLSLLGERYAHLINSADFS
GQYPVHLAVRKDGERCLQLLMEAGAKINMPEQKSGCTALHLAVRDNLLKLACNLITELKA
DVNVCTYGGNSPLHFAASQGSPPLCSMLIAAGADKRMENDEPLFLSSSSSDEDDEIEKND
ADRQLPDDMVQQVHFMSISSERGTFNPRKRPAAGHTPFDLAKCQKVRDLLDGRKGPKPSS
LAPKRTKISTDEVNQGLDSEVLMKLCGILIEDHVPWRELAEKLGMLTLTHLFQESASPCQ
KLLENYQLSGGPVDGLVEALQSLGVSEGVRLLTASQPREDKQSSDSKADSGFGSQSIGEE
MGNPAVTNH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagcactaaggatggatgatacgcagtatccaatgaagtttgacaatgagttt
atggtggaccttccatatctccatgaaccttttgaagtgaagcatgaaccctttgtgaca
gaaacagttcatgggccttacctacagataattgaagagccaaagcagagaggattcaga
tttcgttatgaatgtgagggcccatcccacggtggtctgccaggggcctccagcgagagg
aacagaaggacgtatcccacagtcaaggtgtcaaactacgtgggtcatgctcgtgtggag
gttcagttagtgacgcacacagacccccctcgtgttcatgcgcacagccttgtgggtcgt
cagtgtaacgacaatgggatatgcagcattgatgttgggcctaatgatctcacagcacaa
ttcagtaatttaggtatcctccatgttactaagagaggagtggctgaagtattaacgaaa
aggctgagagaagagaagaggaggacaaaagagcctggatataagtttagtgatgcagag
gaacaggctattacgcaagaagccaaagaattgggcaaaaatatggacctaaatattgta
agattaaagttcactgcttaccttcaggacagcaatgggagtttcacaagagccttgaag
cctgttgtttccaaccctatctatgatagcaaatcaccaaatgcttcaaatctgaagatc
tcccgaatggataaaacctctggatcagtgctgggaggagaagaggtctttctgctctgt
gataaagttcaaaaagatgatattgacatccgtttttatgaggaggaagatgattccgga
tgggaggcgtttggagacttctcccccactgacgtccacaaacagtatgcgatcgtgttt
aagacaccaccgtaccgctgcacagatatctcacgccctgtcacagtgttcctgcagctc
aagaggaagaagggaggcgactgcagcgaacccaagcagttcacgtatattccacacaat
caagacaaagaagaagttcagaggaagaggatgaaggcacttcctcagcactacgataac
tggcggggaggacctcaaggaggagcaggggccttcggaggtcctggatctggaacagga
ggaggtggaatgggaggaggttttcaatttaatcatccgatggatggttcagggtttttc
attggtggatgtggtggatttggtggaggggcacagatgtcaggctccaccccacaggct
gatggatctcagaatcagccaacaaacaaacaaactcagtctgcctctcaaatgcaacag
cagctcattcagattgccacagttctgcagaatcgcgccacttcgatggcaaagggcact
gctcgggctttgttacagtactgcagcacaggggatgtgcgccccctgctggttctgcag
agacatctgtgtggagtgcaagatgagaacggagacacgcctctgcacttggccattatc
catcagcaacctgctgtggtgcaacagcttattcaggccctgaacaacaccccacagcag
aagttcgtcaacaaactcaacaacctcagtcagtctccattgcatctggctgtgatcaca
aagcagcccaagttagttgaggtgctgatgagaaccggggcagacccgagcctgcaggac
cgagagggccggacagcgcttcacttagccgcccacaccggcgatgaggctgtactacga
gtggtcctgagcctgcttggagagcgctatgcccatttaataaactctgctgacttctca
ggtcaatatccagtccatctcgctgtaaggaaagatggagagcgctgtcttcaattgcta
atggaggcaggagcaaagattaacatgccagagcagaaaagtggctgtacagctctacac
ctggctgtgagggataacctgttaaaattggcctgcaatcttattactgagctaaaggct
gacgtgaatgtgtgtacctacgggggcaacagtcctcttcactttgctgccagtcaaggc
tccccacctctctgctccatgctgatagcggcaggtgctgataaacgtatggagaatgac
gagcctcttttcctgagctcgtcttcctcagatgaagatgacgagattgagaagaatgat
gctgataggcagcttcccgatgacatggttcagcaagttcacttcatgtcaatatcatcc
gagagaggaacatttaacccacgcaagagacctgctgcgggacacacaccttttgacctg
gctaaatgccaaaaggttagagatctgttagatggcaggaaaggccccaagcccagttca
ctcgcccccaagaggaccaaaataagcactgatgaagtgaatcagggtttggacagcgag
gtgctcatgaaactgtgtggtattcttattgaagaccatgtaccctggagagagctggcg
gaaaaactgggcatgctcacactcactcacctgttccaggagagtgcctcgccctgccag
aagcttctcgagaactaccagttgagcggtggtcctgtggatggcctggtggaggcgctg
cagtctctgggtgtgagtgaaggagtgagacttctgacagctagccaacccagagaagac
aagcagagctcagattctaaagcggacagtggctttgggagtcagtccattggagaggag
atgggaaatcctgcagtgaccaatcactga
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