Megalobrama amblycephala (Wuchang bream): 125276900
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Entry
125276900 CDS
T08212
Symbol
cfap43
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125276900 (cfap43)
Cilium and associated proteins [BR:
mamb03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
125276900 (cfap43)
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Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_EML
WDR55
CFAP43_N
WDR90_beta-prop_4th
Beta-prop_HPS5
DUF7595
Motif
Other DBs
NCBI-GeneID:
125276900
NCBI-ProteinID:
XP_048060815
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All DBs
Position
LG10:15592898..15607588
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AA seq
1656 aa
AA seq
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MDVLGNLEVRWVQGFTNDTFKFVDKKTACYTCGNFIVFLNVETKTRKTLQSPGSGIGAFT
ASGHRRCLAFSDRLNPSIFVYNYPELEMMCELKGTTKLGYTALALCDTGPYLVSSSSIPD
HTITLWNWENMIPLCSHPLWGEDITALVFNPMNWCQICAVKSKSLTIWNVERCGNYHLMN
PSAVDLPATDGSAIECEANPSHMLSGKLTHLGPQMPTSAVAGLSGDKADNFVPLKGIKPK
LCPSAICWSTSSDLYVGCKEGFLLCVNPDTLLVSVLYKPQTEVTHTDHSETFLQEGSFQS
LVLQDCNLFAAGMEGILRKIQMKGNKLEVVQTWALDEAASTICFSPDGETLLLTSNTGCV
YRFKPLLNDKVVKVLDVLCGDFVAVAALYTDRNVCLSVREAGDVQLWALDDGHCMGSISL
QIQVTSMACCLVAQYVVVGTATGDVLFVEMTTKQKPRLVHRVXFYHVPVDHLVFDQGGNF
LITGASDSRMFVLNARPSKGFEVIGWIEAPGAIVSLSTQYQKESKQVKVLVLCSKTGREI
NEGNVLLLLTLFVEQLTDSTSCVDVHGRLRKDVLHSCLYELPHALCSCILATNKIFGYCQ
QRKVLQRFIIPESGEKPSNVQEAVHLIPEMEAGGHFLSPAFLQLSPHQVWLATVGKDGLL
RICEISTMDRYVQLQCHSCWQDGVGSVCFTPDSQTLITTGLRDGSLVCSRLRLKLSGAGK
ANAATQFGQSIADSFEPVVSSENTVLTNMTDWDSQTQSFTRCSSFYTGEVSFKGKISHEA
EQEENYFASPTSSTWLDGKIDAALQEEIQQYAETKKNLRRNIKVLRDTIKAIMEENESLT
DMEKLKQQEFNLDVQEQQRLQLEGEQEVTRVRKEIEMENLAKCYQREVLKKECWDSMQVK
GKAIKAFHSENEVKNFPMKERTEKELEELHRVETTRQIEQADSQLQEMILDTISEEKMEE
AAEDSPALTGSLSSLYGGVNPYLYNQFNLHVREQKINQITLLKDVIYKVKTTFNKEFEAV
YKQKEQEINRIREKNKRISEIMTELDLSETLWEPKLTDNECPERALTVTDSEIKVEKYLT
PEEKEKEEKLREEEERQRLAAKSDNMRDQALNVMMGGVLELKKEDVLRMEVPQPEFMSKP
EVQWTEEERKSFKEYEKKAKELSEEQEKYRKILETEMKKLLTSIKEATQMFDERLTKLFD
RKVKSEMVIYQEELKIANLVHSIQTEGEILSREKQLSLKLEKARIVKNEIGEELKKHRET
VDEFREVYDNTVAEDKLLDKGFRKEFYDVPGHVVDQLYKLYKRRPRVQKMKTQTENNLFK
EGALLGTAPSDGLSLMMKAMDELDAPENMPEGLDPVVWDRFCLARRAKVESEQKVKLKAL
TLAEMQAFLQRRTDEDEKAQLEIKNLIDELNGLCEEKMRFRLDSMVQIVLQQGQVEVEAG
EFIADFTDALLIHRGVIEDLNSTIRALGDQKIASMVECKDFRKGIIQQEWDHRRMRMQLE
DLSNKARDIQTLRITQEIQDYLNETSNDNRVPKQLTTLERTIDLQKTTHQKKIEACKKQI
KHLNRQDAQMQEKNTALDSKMAEMEITVAERRNIFEAVAMGDNQETEAEKNYQDIILRKK
LLAIAGAQSEEILILRAELEKLRMKNFPSLSQLHYN
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atggatgtactgggaaacttggaagttcggtgggtgcaaggattcaccaatgacacattt
aaatttgtcgacaagaaaacagcatgctacacctgtggaaacttcattgttttcctcaat
gtggaaactaaaacgaggaagactctgcagagtcctggttctggtattggggcctttaca
gcaagtggacatcgcaggtgtcttgctttctctgacagactgaatccttccatctttgtc
tacaactatccagagcttgagatgatgtgtgaactgaaaggtacaactaaactgggctat
acggctttggcactgtgtgatactggcccttatttagtcagttcttcctccatacctgat
cacactatcacgttatggaactgggagaatatgattccactttgcagccatccactttgg
ggagaggacatcacagcactggttttcaaccccatgaactggtgtcaaatttgtgctgta
aaatctaaatcccttaccatctggaatgttgaaagatgtggcaactatcatttgatgaat
cctagtgctgtcgatctccctgccactgatggttcagctattgagtgtgaagcaaacccg
tctcatatgctcagtgggaagctgacacacttaggtcctcaaatgcccacttcagcagtc
gctggactgagtggagacaaagctgacaactttgtgcctttgaaaggaataaaaccaaaa
ctgtgtccaagtgccatctgctggtcaacttcttctgacctgtatgttggttgcaaggaa
ggttttctgctttgtgtgaatcctgacactttgcttgtctctgtcctgtataaaccccaa
actgaagtaacccacacagatcacagtgaaacgtttctacaggagggcagtttccagagc
ttagtattgcaggactgtaatctctttgctgcaggaatggaaggcattttacgaaaaata
caaatgaaaggaaacaaattggaggttgtgcagacatgggctttggatgaggcagcatcg
actatatgcttttcccccgacggtgagacactgctgctaacttctaacacaggctgtgtt
tacagattcaaaccactgctgaatgataaagtggtcaaagtcctagatgtcctctgtgga
gattttgtggctgttgctgcgttatacactgatagaaacgtttgtttgtcagtcagagaa
gcaggagatgtacagttgtgggctctggatgatggacattgcatgggctctatctctctg
caaatacaggtgacaagtatggcatgctgcctcgtagcgcagtatgttgttgtagggaca
gccactggagatgtcctgtttgtggagatgactacaaaacagaagcccagactagttcac
agagttncattctaccatgtccccgtagaccatttggtgtttgatcaaggtggcaacttc
ttaatcacaggagcatcagactcacgcatgtttgtgctgaatgcaaggccatcaaaagga
tttgaagttattggatggattgaggctccaggtgccattgtaagcctctccacccaatac
caaaaagaaagcaaacaggttaaagtgctggtgctatgcagcaagacagggagagaaatc
aatgagggaaatgtacttctactactgacgttgtttgtggaacagcttacagactcaaca
agttgtgtggatgtccacggccgtctgcgtaaagatgtccttcacagctgtttgtacgag
ctccctcacgcactttgctcttgtatcctggccacaaacaagatatttggttactgccaa
cagagaaaagtcttgcaaagattcattatccctgagagtggtgaaaagccctctaatgtg
caggaagcagttcaccttataccagagatggaggcagggggtcattttctgagccctgca
tttctacagctctcaccacatcaagtctggctggcaacagttggcaaggatggactgctc
cgcatctgtgagatttcaacaatggacaggtatgtgcagctgcagtgccactcatgttgg
caggatggagtcggatctgtttgtttcaccccagacagtcagaccctcatcaccactggc
ctgagggacggctcgctcgtctgcagcaggctaaggttaaagctttctggggctggcaaa
gcaaatgcagctacccagtttggtcagtcaattgctgattcttttgagccagtagtatcc
tcagagaacaccgtcctcaccaacatgactgattgggattcacagacacaatcctttacc
agatgttcctcattttatacaggagaggtcagttttaagggaaagataagtcatgaagct
gaacaagaggaaaactattttgcatccccaactagttctacatggcttgatggcaaaatt
gatgcggctctccaagaagagatccagcagtatgcagagacaaagaaaaatctaagaaga
aacattaaggtgcttcgtgacacaatcaaagctataatggaggagaatgagagtctaaca
gacatggagaaacttaagcaacaggaatttaacttggatgtgcaagagcaacagagactg
cagctggagggagagcaggaggttaccagggtgaggaaggagattgagatggagaatctg
gccaagtgctatcagagggaggtcctgaagaaagaatgctgggattccatgcaagtcaaa
gggaaagccattaaggcctttcattcagaaaatgaggtgaagaacttccccatgaaggaa
cgcactgaaaaggaactcgaagagcttcatagggttgagaccacgaggcagattgaacag
gcagattcacaacttcaagagatgattttagacacaatctctgaagagaaaatggaggag
gcagcagaggacagtcctgctctgactggcagtctgagttctctttatggaggcgtcaat
ccttatctctacaaccagtttaacttacacgtcagagagcagaaaatcaaccaaatcacc
ttgctaaaggatgttatctacaaagtgaagaccacgttcaacaaagaatttgaggcagtt
tacaagcagaaggaacaggaaatcaaccgtattagagagaagaacaagcgtatctctgag
attatgaccgagctggacctaagtgagacactgtgggagcctaaactcaccgataatgag
tgtcctgagagagctcttactgtgaccgactcagagatcaaggttgagaaatacctcacc
cccgaggagaaagaaaaagaagaaaagctaagagaagaagaagaacggcaaaggcttgca
gccaagtctgataacatgagagatcaagcactcaatgtgatgatgggtggagttctggag
cttaaaaaagaggatgtgttgaggatggaagtaccacagcctgagttcatgtctaaacct
gaagtacagtggacagaagaagagagaaagagcttcaaagagtatgagaaaaaagcaaag
gagctcagtgaggagcaagagaaatacagaaaaatactggagacagaaatgaagaaactg
ctgacatctattaaagaggctacccagatgtttgatgaaagactcacaaagctgtttgat
aggaaggtgaaatcagagatggtcatataccaagaagagctcaagattgcaaatctggtt
cactccattcaaaccgaaggagagatcctcagcagagagaaacagttgagccttaaactt
gagaaggcacgaattgtaaagaatgaaattggggaagaattgaaaaaacacagggagacc
gttgatgagtttagagaggtgtatgataacacagtcgctgaggacaaacttcttgacaaa
ggatttcggaaagagttttatgacgtccccggacatgtagttgaccagctctataagctt
tataaacgcagacccagggttcagaagatgaaaactcagactgaaaacaacctgtttaaa
gagggggcactattaggaacagccccatctgatggactttctctgatgatgaaggccatg
gatgagttggacgctccagagaacatgccggaaggattagatccagtcgtgtgggatagg
ttttgcctggccagacgggccaaagtggaaagtgaacaaaaggtcaagctaaaggcattg
accctggcggagatgcaggcatttcttcagaggagaacagatgaggacgagaaagctcaa
cttgaaatcaaaaatctcattgatgaacttaatggcctttgtgaagagaagatgaggttt
cgactggacagcatggtgcagatcgttctacagcaaggtcaggtggaagtggaggctgga
gaattcattgctgactttaccgatgctctgctgatccatcgtggagtaattgaggacctg
aacagcaccatcagggctttaggagatcagaagattgccagcatggtggagtgtaaagac
ttccgcaaaggaatcatacagcaggagtgggatcacaggagaatgagaatgcagctggaa
gatctcagcaacaaagccagagacatacagaccctgcgcatcactcaggagattcaagac
tacctgaatgaaacaagtaatgacaacagggtgccaaagcagctcacaactctggagagg
accatagacttacagaaaacgactcatcaaaagaagattgaggcttgcaagaaacagata
aagcacctgaacagacaagatgcacaaatgcaagagaagaacacagccctcgactcaaaa
atggctgaaatggagattacagtcgcagagagaagaaatattttcgaggctgttgcaatg
ggagataaccaggagacagaggcggagaagaactaccaagatatcatcttgagaaagaag
ctgctagccatagccggagcacaatctgaagagatactcatactgagagcagagcttgag
aaactgcgcatgaagaacttcccatctctttctcaactacactacaactga
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