Megalobrama amblycephala (Wuchang bream): 125276934
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Entry
125276934 CDS
T08212
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125276934 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125276934 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125276934 (pdlim1)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
125276934
NCBI-ProteinID:
XP_048060892
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All DBs
Position
LG10:complement(16237995..16244885)
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AA seq
322 aa
AA seq
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MPVRVVLQGPGPWGFRLVGGKDFEQPLTISRVTPGSKAAQADLCMGDMILAIDGESTDGM
THLEAQNKIKACMEEMVLSIDRSESKMWSPLVSEEGKTNPYKMNLANTETQEVKHIGSAH
NRSAIPFNSGSPRVVTNLYNNPAGLYSSENIKSFNTAVDDVQTSSVSNEASRISDPCKPG
QPKPALPADSEVYKMLQENQESNEPPRQSASFKVLQEILETGDADKPSGFRSVKPPTTKI
GASVGNPEKLSLCDKCGSGIIGMIVKVRDKFRHPECYVCTDCGINLKQKGHFFVEDKIYC
EKHARERVTPPEGYDVVTVFPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacgggttgtcttacaaggccctggaccgtggggattccgtctggttggaggg
aaagatttcgagcagcctcttacaatctcgagggtgaccccaggaagtaaagcggctcag
gctgacctttgcatgggggacatgatcctggccatagatggtgagtcaacagacggcatg
actcacctggaagcacagaacaaaatcaaagcctgcatggaggaaatggtgctttccatt
gacagatcagagtcaaaaatgtggtccccactggtcagtgaagaaggaaagaccaatcca
tacaagatgaatctggcaaatacagaaacacaggaggtgaaacacataggctctgctcat
aacaggagtgctattccattcaattctggcagtcccagggtggtcactaacctgtacaat
aaccccgctggcctgtattcctctgagaacataaagagtttcaacactgcagtggatgat
gtccagacttcttctgtctccaatgaagccagcaggatctcagatccctgtaaacctggc
cagccaaagcctgcattacctgcagactctgaggtgtacaaaatgctgcaggagaatcaa
gaatccaatgagcctcctcgccaatctgcctcttttaaagttctgcaggagatcctggaa
actggtgatgcagataaaccctctggcttcagaagtgtcaagccccccaccacaaaaatt
ggagcctcagttgggaatcctgaaaagctctctctttgtgacaaatgcggttcagggatt
ataggaatgattgtcaaagttcgagataagtttcgccacccagagtgctacgtttgcaca
gactgcgggatcaatcttaagcagaaaggacacttttttgtcgaggacaagatttactgc
gagaaacacgcacgtgaacgcgtcactcctccagagggttatgacgttgtgactgttttt
ccaaagtag
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