Megalobrama amblycephala (Wuchang bream): 125277293
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Entry
125277293 CDS
T08212
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125277293 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125277293 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125277293 (srsf5a)
Spliceosome [BR:
mamb03041
]
Common components
Common spliceosomal components
SR proteins
125277293 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
PH_35
Nup35_RRM_2
DUF4090
QWRF
Motif
Other DBs
NCBI-GeneID:
125277293
NCBI-ProteinID:
XP_048061613
LinkDB
All DBs
Position
LG10:complement(28881182..28885425)
Genome browser
AA seq
312 aa
AA seq
DB search
MCLRCIRARDSPPITLPPAREHAYKCFCARPRLSVSRPTPFCPVSRDFIESLITMSGCRV
FIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKELCSER
VTIEHARSRRGRGGGPGMGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVENLSSRISW
QDLKDLMRKVGEVTFVDAHRTNKNEGVVEFASHSDMKNAIEKLDGTDLNGRKLKLYEDRK
RNRSRSRSRSRSSSRSRSPSRSRSPERGSKRSRSRSASRTPEKNTSNRSPSRSPSPPRKQ
SRSRSASAESQH
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttaagatgtatacgtgcacgagactcgcctcccattaccctcccccctgcgcgt
gaacacgcatataaatgcttctgcgcgcggccgcgtctctcagtctcgaggccaacgcca
ttttgtcctgtaagcagagatttcattgaatctttaatcacaatgagtggatgtcgcgtg
ttcatcggccgtctgagcccccatgctcgggaaagagacgtggagaagttctttaaaggc
tacggacgtatcagagagattaacctgaaaaacgggtttggctttgtggagtttgacgac
cacagggacgcagatgacgcagtgtatgagctgaatggaaaagagctgtgcagcgagagg
gtgactattgagcatgctcgctctcgcagaggaagaggtggcggcccaggaatgggagga
cgtttctctccacgctttggagggtaccgtcagtcccgcagtgggggttccaggtatgga
ccaccagtgcgcacggagcacagaatcattgtggagaatctctcctctcgaatcagctgg
caggatctgaaggacttgatgaggaaggtgggagaagtgacctttgtggatgcacacagg
accaataagaatgagggggtggtggagtttgcttcacacagtgatatgaagaatgccatc
gagaagctggatggaacagatctgaacgggcgcaagctcaagctgtatgaggatcgcaag
aggaatcgtagcaggagtcgttcccgcagcaggagcagctcccgttcccgttcgcccagt
cggagtcgcagcccagagcgtggaagcaagcgctctcgcagccgctcagctagtcgcacc
ccggagaagaacaccagcaaccgctctccttcccgctcgccgtctcctccaaggaaacag
agccgctcccgatctgcctctgcggagagtcagcactga
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