Megalobrama amblycephala (Wuchang bream): 125277336
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Entry
125277336 CDS
T08212
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamb03016
]
125277336 (tarbp1)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125277336 (tarbp1)
Enzymes [BR:
mamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
125277336 (tarbp1)
Transfer RNA biogenesis [BR:
mamb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125277336 (tarbp1)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125277336 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
XLF_CC
Motif
Other DBs
NCBI-GeneID:
125277336
NCBI-ProteinID:
XP_048061688
LinkDB
All DBs
Position
LG10:complement(30119727..30152730)
Genome browser
AA seq
1595 aa
AA seq
DB search
MSNFLIKTLLSRYPDPENLINNLCWPSTSRPDIEKIEALTVLIKELSNKSQEERFISKVQ
SVIWDQCVPLLQMISSADDGGKDLLSAVCGLFAVCVSVCQADDVPGQVLHVLLQVLMTRD
DGNHETDRLNVDVAIEVTAVLLSSISYDGDIISRTLSCTLSCVKDLSDSIISKIIVRIWF
TILKSCNKEAESEVLRQIWDDLLSWHQRDQTESASARVLLCLTALSDHLYSSETSQNRPD
PRRSQRFFRAIQAGLTHKDSVTRKRALYLLTRCVALAEIKKEDVFTSEEPHTDEILFRWA
PEKQQLLREFWEDFALVLETLEENQIHVIRPVLNRIDMLVETTATDIQGGLFSPSWLLCV
YQRMFHSENKAVMKEGVNHLLELKALHRSAFALAFSQFVIGPLMDVLAESSLYHRAPQQN
IRDCPELGVKLQIFVVNFFSSLPEENRGSVLLQLIQRLGSRQWCAVPLLFLSQALFCLSP
CPLLGSDGLNAFREVLRCTMITHQVLLRGASQCFLLHAALCLTDVTTVSLDEIFGFLVHF
RADESLCRGTALWKELCNWLQTNEGRFRLTDGDLGSSVELRTATSNSKGASIFIYVQQRL
KTFLTVPANTDQTGSLPDPGEAELLARTVLLTADLQQTRSEEPGLELLLQPLLDVLRRLS
TNVYLVLHKTDKSLQLLLRLLQLHRRRSDTEKENEDVVAVALKTHMLSVVDSVQEFLLRR
LSGELRELCDVERSELYLSVLRELVLTYSTVSWYGSNLQQNYIPKLTTHCLRILNEPSEQ
VQHSTQNPSVSGQVQRVVSMATLALLCDMADRGVLKSQSEAMRSLHSLTNYFYPSSSSQH
LNQTLLKPTTATVSHPEDGLLLKDWGRIVAQFIGNQWMCLSFLQKTAGTPRAPEAPEILR
AAVDALALLPGHLVLPVLDFMASVLPQQVVLCEESLCVEAICASWKVVQALSTNPHDFWS
TLQGFVRLAFNQGLLQLTEEQNPRITACIQQIVSELMELAQVRSGVFNVLIQHCCETWLP
SGAAEGVQSDAVFSTALLHLNILTEACVYGPVFRRDQRLVQEVQSYVEQLGDTCAANTAV
SSDNRDDQYPRVCALAFLCRLNPSNHLHQRLMEELVQRLLRKDAEISKSKVRYYSNSIQH
RVKNRVWQTLLLLLHKLRPEFVSDCVLSHVCEAGFCSNQASVKYLIEWALILILHQNPSH
IQNLWNCFSLDHEKTKTSICTFLSVLVHMNVLLPKLQDKEVQWRRAVEVSLQWCFSHNFS
VRLYALLALKRVWELEDARVHTEENLGGLTTVVQACLQQAEAMQNTGNAMKNWSRIQEHF
FFSAFHPIRDYSVETIFQTFPSLSELAEDEWLPLWKFESFVVFPICTALPLKNHASDLGE
LQPGDWIQQDKGDLEQEERWAEVQKKITPWKLSVQEQEPELIAQQRAARLGKLTSSLLVV
ASLIDKPTNLGGLCRTCEIFGAKALVLDSLRHINDKQFQALSVSSELWLPMLEVKPAELS
DYLQLKKREGYWVIGVEQTSNSQSLQDYTFPERSLLLLGNEREGIPANLLQLVDVCVEIP
QHGVTRSLNVHVSAALLVWEYTRQHLGQNPAAPLC
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattttttgataaaaaccctactgtcccgttatcccgatccggagaatttaatc
aataatttgtgctggccaagcacttcacgccccgatatagagaagattgaagctttaact
gttttgatcaaggagctctccaataaatcacaagaggagcgctttattagtaaggtgcag
tcagttatatgggatcaatgcgtgcctctactgcaaatgatctccagtgcagatgatgga
ggtaaggatctgctcagcgctgtgtgtggactctttgcggtgtgtgtcagtgtctgtcag
gctgatgatgtacctgggcaggtccttcatgtccttctgcaagtgcttatgacgagagat
gatggtaaccatgaaaccgacaggcttaacgtagatgttgccattgaagtcacagcagtg
ctgttgtctagcatctcatatgatggagacatcatctccaggactctatcctgcaccctt
tcctgtgtcaaagatctttctgactccatcatttcaaaaatcatagtacggatctggttc
accatactcaagtcctgcaataaagaagctgaatcagaggttctgcgtcagatatgggat
gatttgctgtcatggcatcagagagatcagacagaatcagcgtcagctcgggttctgttg
tgtctcactgctctctccgaccacctctactcttcggaaacctctcagaaccgaccggac
cctagaagatctcaaaggttttttagggcaattcaggccggattgactcacaaggacagt
gtgacccgcaaacgggctctttacctgctcaccaggtgtgtggcactggcagagatcaag
aaagaagatgtgtttaccagcgaggaacctcatacagatgaaatcctgttcagatgggca
ccagaaaaacagcagttactgagagaattctgggaagattttgctctagtgttagagact
ctagaggagaaccagattcacgtgattcgacccgtactcaacaggattgacatgcttgtt
gagacaacggcaactgatattcaaggtgggctgttttctccatcctggctgctgtgtgtg
taccagcgcatgtttcacagtgagaacaaggcagtaatgaaagaaggagtcaatcacctg
ttagagctgaaagcactccatcgttctgcgtttgctttggcattctcacagtttgttatc
ggccctctcatggatgttcttgcagagagctccctctatcacagggcaccacagcagaac
atcagagattgtccagagctgggagtgaaactccagatctttgtggtgaatttcttcagc
agtttgccagaagagaacagaggttcagtgttgctgcagctcattcagcggttgggttca
cggcaatggtgcgcagtgcccctgctctttctgtcccaggccctgttctgtctgtctcct
tgtcctttactaggatctgatggactcaatgcgttcagagaagttctgcgctgtactatg
atcactcaccaggttcttttgagaggagcttcacagtgttttctgctccatgctgctctc
tgcctgacagatgtgacaactgtatctctagatgagatatttggtttccttgtacatttt
cgagctgatgagtctctatgtcggggtacagcactttggaaagagctgtgtaattggctc
cagactaatgaaggccgttttcgtttgactgatggcgatttaggctcctctgttgagctt
cgcactgcaacttcaaacagtaaaggagcttctatattcatctatgtccagcagcgactg
aagaccttcctcacagttccagccaacacagatcagacaggaagtctacctgatccaggt
gaggctgagctgctggcgcggaccgtactgcttacagcagacctgcagcagaccaggagt
gaggaacctggtctagaattgcttctccagcccctactggacgtcttacggagacttagt
actaacgtctatctggtgctgcacaagacggacaagagcctgcagttactgctgcgctta
ctgcagctgcatcgcagacgctcggatacagagaaggagaatgaagatgttgtggctgtc
gctttgaagacgcacatgctgtcagtggtggattcggtgcaggagtttctgctgaggagg
ttgagtggggaactgagggagttatgtgatgtggagaggtctgaactttatctctcagta
ttaagggagctggttcttacttactccactgtttcgtggtatggttcaaatctgcagcaa
aactacatcccaaaactcaccactcactgcttgaggatcctcaatgaaccttctgaacag
gtgcagcactcaacacagaatccctctgtgtcagggcaggttcagagagtggtcagtatg
gccacacttgcgctgttgtgtgacatggctgatcgaggtgtcctgaagtcccaatctgaa
gccatgagatcacttcactcgctgaccaactatttctacccttcatcatcatctcagcat
ctcaaccagacattactgaaacccacaactgcgacagtcagtcatccagaggatggtctc
ttgctgaaggactggggacgaattgtggcccagtttattggaaatcagtggatgtgtttg
agtttcctgcagaagactgctgggacccctcgggctcctgaagctcctgagatcctgagg
gctgcggtggatgctttggcattattgcctggccatctcgttctgccggtgctagacttc
atggcatcagtcttaccacagcaggtggtgctgtgtgaagaatctctttgcgttgaggcc
atatgtgcctcatggaaggtggttcaggctctgagcacaaaccctcatgacttctggtcc
acactgcagggattcgtgcgcttagcttttaaccaggggcttttgcagctcacggaggaa
cagaaccccagaatcacggcctgcatacaacagattgtgagtgagctcatggagttggct
caggtccgatcaggggtgtttaatgttctgatccagcattgttgtgagacgtggcttcca
tctggggcagcagagggtgttcagtcagacgctgtgttcagtacggctctcctacacctc
aacatcctgactgaagcgtgtgtgtacggcccggtgttcagaagagaccaaaggcttgtt
caggaggttcaaagctatgttgagcagcttggtgatacttgtgcagcaaacacagctgtc
agcagtgataacagagacgatcagtatcctcgagtgtgtgctttggcttttctctgccgc
ttgaatccatctaatcatcttcaccagcgtctgatggaagagcttgtgcaacgactactg
aggaaggatgccgagatctcaaaatccaaagtacgttactatagcaactccatccagcac
agagtgaagaaccgcgtgtggcagacgctgctgctgctactgcataaactcagaccggag
tttgtgtcggactgtgtgttgagtcacgtgtgtgaggccgggttctgcagtaaccaagca
tccgtcaagtacctgatcgaatgggccctgatcctgattctccatcagaacccgtctcac
atccagaacctgtggaactgtttcagcctggatcatgagaagacaaaaacaagcatttgc
acctttctctctgtcctcgtgcacatgaatgtcctcctccccaaactgcaagataaggag
gtgcagtggcgtagagcggtggaggtgagcctgcagtggtgtttcagtcataacttcagc
gtccgtctgtatgccctgctcgcccttaagagggtgtgggagctggaggacgcccgtgtc
cacacggaggaaaacctgggcgggctgaccacagttgtccaagcttgtttacaacaggct
gaagccatgcagaacaccggaaatgcaatgaaaaattggtctagaatccaggaacatttc
ttcttcagtgctttccaccccatcagggattacagtgttgagacaatattccagaccttt
cccagcctctcagagttggcagaagatgagtggcttccactgtggaaatttgagagtttt
gttgtcttcccaatatgcaccgccctgccattgaagaaccatgcgagtgatcttggtgaa
ctccagcctggtgactggatccagcaggacaaaggtgatttggagcaggaagagcgctgg
gcagaagttcagaagaaaatcaccccgtggaagctgagtgtccaggagcaggagcctgag
ctcatcgcccagcagagggcagcacgtctgggcaaactcaccagcagcctcctggtggtc
gcatcgctcattgacaagcccaccaatctgggcggtctgtgcaggacgtgtgagatcttt
ggggccaaagctctggttctggacagtctgcgacacattaatgataaacagttccaggcg
ctcagtgtgtcttcagagttgtggctgccaatgcttgaggtaaagcctgcagagctgtca
gattacctgcagctgaagaagagagagggatactgggtaataggcgtagagcaaacatcc
aacagccagagtttacaagattacacttttcctgagagaagccttcttttacttggtaat
gaaagggaaggcattcctgcaaacctgctgcagctggtggatgtgtgtgtggagattcct
cagcacggtgtcacccgctccctcaacgtgcacgtgagcgccgccctgctggtgtgggaa
tatacacgccagcatttaggacaaaaccccgcagcccctctgtgctga
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