Megalobrama amblycephala (Wuchang bream): 125277601
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Entry
125277601 CDS
T08212
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125277601 (ldb3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
125277601 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:
mamb04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
125277601 (ldb3a)
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Ortholog
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GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
LIM_FHL2-3_N
PDZ_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
125277601
NCBI-ProteinID:
XP_048062045
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All DBs
Position
LG10:14297853..14339984
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AA seq
716 aa
AA seq
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MSSYNVSLAGPSPWGFRLQGGKDFNMPLTVSRITPGSKAASSNLNQGDIIVAIDGVSTEG
MTHLEAQNKIKSANFNLALTMQKSKRPTPVPMTTPRIDSPMTVIPHQKVITHTPANNEYL
SSFNPIALKDSALSTNKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQARGS
EMSGNLPVKDHVIDSASPVYQAVIPSETNELGPSDWTKRAAQLQSKSFRILAHITGTEYM
QDPDEEALRKSREMFESEAKGPRFAKLKNWHHGLSAQILNVPHQFLTSLQPNLVSSTPAE
HAPVSTSIASVCAPIIAASPNELLSEPQIVNQAPEPDAEQIPEQTTVSSFNLQTSMGYTS
QYKTSISSPYAQPQPMHQQPPMHQQPPMQQPPPMQHSSIQIPVGPPPPKVVSTATIMPTA
YPAGPAPAPPMVYKPAPPPPAPVAAPASSNRPPWVTDENFAHKFDPSKPTTTTHIKVQPL
PQAAPPPPAYIPNPVPAPVAPSPAFNPSPAPFSPAPFPPVARGVAQRAERFAASNRTPLC
GSCNNIIRGPFLVALGRSWHPEEFNCHYCHTSLADVSFVEEQNNVYCENCYGEFFAPTCA
RCNTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHG
CDFPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttacaacgtgtcactcgctggaccatcaccttggggcttccggttgcaagga
ggcaaggacttcaacatgcccctcaccgtttctaggattacaccagggagcaaggcagcc
tccagcaacctgaatcagggtgacatcatcgtggccattgatggggtcagcacagagggg
atgacacacctggaggcccaaaacaagatcaagtctgccaacttcaatctggccctcacc
atgcaaaagtcaaagcgacccacccctgttcccatgacaacaccaaggattgactcccct
atgactgtgatcccccatcagaaggttattacccacactcctgccaacaatgagtacctg
tccagcttcaatcctatagctctgaaggactctgccctgtccaccaataagcccattgag
gtgaaggggcctggaggcaaggccaccatcatccatgcccagtacaacacccccatcagc
atgtactcccaggatgctattatggatgccattgctggccaatcccaggccaggggtagc
gagatgtccggtaatctgccagttaaagaccatgttatagacagtgcttccccagtgtat
caggccgtcattcccagtgaaaccaatgaactgggtccctctgattggactaaaagagcc
gcccagctgcagtccaagtccttccgcatcctcgcccacattactggaactgaatacatg
caagaccctgatgaggaagctctgagaaaatcaagggaaatgtttgaatctgaagccaaa
ggccctcgtttcgctaaactgaaaaactggcaccatggcctgtcggcacaaatacttaat
gtgcctcatcagtttctgacatcactgcaacctaaccttgtatctagtactcctgctgag
catgctccagtttccaccagcattgcatctgtatgtgcacctattatcgctgcttcgccc
aatgagctcctttcggagccgcagatagtcaatcaggcacctgagcctgatgcggagcag
attcctgagcaaaccactgtaagcagcttcaacttgcagacatctatgggttacacttct
cagtacaaaacctccatctccagtccttatgcccagcctcaacctatgcatcagcaacca
cccatgcatcagcaaccacccatgcagcagccgccacccatgcagcacagctccatccag
atccctgtaggtccacctccacctaaagtggtcagcactgccaccattatgcccacagcc
tatccagccggcccagcaccagctcctccaatggtttacaaacctgctccacctccacct
gctcctgtcgcagctccagcgtcttccaacaggcctccttgggttactgatgagaacttt
gcccataaatttgaccctagcaaacccaccaccaccacacatatcaaagtgcagcctctt
cctcaggcggcaccaccaccaccagcctacatccccaacccagtccctgctcctgttgca
cccagccctgcattcaacccttcccctgctccgttcagccccgctcccttcccacctgtg
gctcgtggagttgctcaaagggcagagcggtttgcagccagcaacagaacacctctgtgt
ggatcctgcaacaacatcatcaggggaccattcctggtggcattgggtcgttcctggcat
ccagaggagttcaactgccattattgccacacgtctctggctgatgtcagctttgtggag
gagcagaataatgtttactgtgagaactgctacggagagttctttgcacctacctgtgcc
cgctgcaacaccaagatcatgggagaagtgatgcatgcactgcggcagacctggcacacc
acttgctttgtgtgtgcggcttgtggaaagccctttggaaacagcctctttcatatggag
gatggtgagccgtattgtgagaaagattatattgcactcttcagcacaaagtgccatgga
tgtgactttccagttgaggcaggagacaaatttattgaagctcttggccacacatggcat
gatacctgctttgtttgtgcggtgtgccatgtgaacctggaaggacaaccgttttactcc
aagaaggacaagcccttatgcaagaagcatgcacatgccatcaatgtgtag
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