Megalobrama amblycephala (Wuchang bream): 125277771
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Entry
125277771 CDS
T08212
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125277771
04121 Ubiquitin system [BR:
mamb04121
]
125277771
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125277771
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125277771
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
P_C10
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
125277771
NCBI-ProteinID:
XP_048062231
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Position
LG11:14573147..14577498
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AA seq
628 aa
AA seq
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MDKLRPAPSHLKSDVWQHFGFSEDTEGVVDKSHTVCKVCSAKFKYFGNTTNMKKHITRFH
SELEKQHSLPITNTPGYIQRTLDQVAKLPPNSEKAKRITRSVAGFIAKDLRPYSVVENQG
FRTMLQVLEPRYTLPLRRYFSETAVPALYSECKDHILESLSNTDRVAITCDAWTSITTES
YVTITAHYITDEWKLAACVLQMRAMSESHTGANIAELLHNVSDEWKIRNKDLVLVSDNAS
NMAVAAQLGKFSHVRCYAHTLNLASQQALKLPSVSRLLGRVRRIATFFHRSAIANHQLKE
KQKQLNLPSHKLKSDVITRWNSAYEMLERFLEQQPAVCAALLSQEVRKGAAEIFTLTESD
ISCSEDVITALKPMKDATLLMSEESSPTACLIAPLHAKLIQDMKENTEEKSVMIREIKRV
ICEDLSKRYTTNQETSLLNKCASLDPRFKALPFLSKEKREETYKTLITEASSLQEQKVPD
NLEDSTVKEANISVSPQPEVTELQDDCPTTSKGRASSLLHNLLGQTFSDASDTPYHQSPS
ALVEEEMTRYCSTPPLPLTEDPLNWWHVNKVSFPVLSKMAKRYLCIPATSVSAERVFSTA
GDIVTAQRSTLTSEHVDQLLFLHKNLVL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactacgacctgcaccatctcatttaaaatcggatgtgtggcaacattttgga
ttttctgaagacaccgaaggtgtcgttgataaaagccatactgtgtgcaaagtctgtagc
gccaaattcaaatatttcggcaacacgactaacatgaagaaacatattacgcggttccac
tcagagctggagaaacagcattctcttccaatcacgaacactcccggttacattcaaagg
accctggatcaagtagcaaagcttccaccgaattctgaaaaggcaaaacgaattacccga
tcagtggcgggttttattgccaaagatctgcgcccgtactccgttgtggaaaaccaagga
tttcgcacgatgttacaggtacttgagccacgatacactttgcccttgcgtcgttatttt
agtgagacggctgtccccgcactctacagtgagtgtaaagatcacatcttagaatcccta
agtaatacggacagagtggcaataacatgcgatgcatggacatcaattacaacagaatcg
tatgtcactattacggcacactacattacagatgagtggaagcttgcagcttgtgttctg
caaatgcgtgctatgagcgaaagtcacacaggggcgaatattgctgaactactgcacaat
gtttcagacgaatggaaaattcggaacaaagacttggttttggtgagtgacaatgcctct
aacatggctgttgcagcacagctcggcaagttttcacatgttagatgttatgcgcacaca
ctgaatttggcttcccaacaagcgctgaagttgccgtctgtgtcaaggttgttagggaga
gtgaggcggatcgcgacttttttccaccgcagcgcaattgcaaaccatcagttgaaggag
aagcaaaaacaactaaatcttccgtctcacaaactgaaatcagacgtcatcactagatgg
aacagcgcatacgagatgcttgaaagatttcttgaacaacagccggctgtctgtgctgcg
ttactatcacaggaggtgagaaaaggagcggctgaaatcttcactctcacggaatccgat
atttcatgcagtgaggatgtgataactgctcttaagcctatgaaagatgccacacttctg
atgtcagaggagagcagccccactgcgtgtttaattgccccattgcatgctaaactgatc
caggacatgaaagaaaacactgaggaaaaatcagtgatgatcagggagataaagagggtc
atatgtgaggacctcagcaaaaggtacaccactaaccaggagactagccttcttaacaaa
tgtgcttctctcgacccacgctttaaggcactgccttttctttccaaagaaaagagagag
gaaacttacaaaacactgatcactgaagcttcatcattacaagagcagaaagtgcctgac
aatctagaagacagcactgtgaaagaagccaacatctcagtgagcccacagcctgaagtc
acagagttgcaggatgactgtcctactacttcaaaaggaagagcttcatctctgcttcac
aatctgctggggcagaccttctctgatgcttcagatacaccatatcatcagtcaccctct
gccttggttgaagaggagatgaccaggtattgcagtaccccaccactccctctaacagag
gaccccctcaactggtggcatgtcaacaaggtgtcatttcctgtgctctccaaaatggca
aagagatatttatgcattccagcaaccagtgtgtctgcagagagggtcttctccactgca
ggtgatattgtgacagcacagcgaagcacacttacttctgaacatgtggaccaactgctg
ttcctacacaaaaacttagtattatag
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