Megalobrama amblycephala (Wuchang bream): 125277786
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Entry
125277786 CDS
T08212
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04137
Mitophagy - animal
mamb04140
Autophagy - animal
mamb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
125277786 (hif1ab)
04137 Mitophagy - animal
125277786 (hif1ab)
04148 Efferocytosis
125277786 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125277786 (hif1ab)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
125277786 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
125277786
NCBI-ProteinID:
XP_048062246
LinkDB
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Position
LG11:15058689..15078310
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AA seq
774 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAHQLPLPHNVTSHLDKASIMR
LTISYLRMRKLLSSDDTDKENEVESQLNGFYLKALEGFLMVLSEDGDMVYLSENVSKSMG
LTQFDLTGHSVFEFSHPCDHEELREMLVHRTVSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCAGHVRVQERSEGSGDSGFKEPPLTYLVLICDPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFAKGQATT
GQYRMMAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDIVLSLQQTMTEPK
AVEKESHKIEDEVSEVDMLKLFKPENLKCPMECSDLYEQLKEEPEALTVLAPAAGDTIIS
LDFNNSDSDMQLTKDVPVYNDVMLPSSSEKLPISLSALATSDPTPALSKLETGAEDFPFS
SASDHVPDSANTPSTSGLGSSGPNSPMDYCFQVDSDISSEFKLDLVEKLFAIDTEAKTPF
TNQGIEDLDLEMLAPYIPMDDDFQLRTPSPLDPLPSSSLSVSAMSSLFQPLPSPGSPASS
SSSAVKKEPSSRAPSPLHLLQEVCSAPVSPFSGSRDTSPTRSPTPQSSNQLNNRELSPKM
LAIQNIQRKRKLEEVTSLSEAVGLGALLQSVDSAIEPGKRAKVLEVKGSSVLGGNRTILI
LPSDVASRLLCSSLESSGGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQVN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagcgcgatctcgcaggggaaaggagtccgaggtgttctacgagttagct
caccagcttcccctaccacacaatgtcacttcccacctggacaaagcctccatcatgagg
ctgaccatcagctatctgcgcatgaggaagctgctcagctctgatgacaccgacaaagag
aatgaggtggagagtcagttgaatggcttttatctgaaggccctggagggtttcctcatg
gtcctgtctgaggatggagacatggtttatctctctgagaatgtcagcaagagcatgggc
ctcacacagtttgatctgactggtcacagcgtctttgaattctcacacccatgtgaccat
gaggagttgagagagatgctggtccataggacagtatctaaaaagaccaaggaacaaaac
acagagcgcagcttcttcctgcgtatgaagtgcacactcactagtagaggacgcactgtc
aatatcaagtctgctacgtggaaggttcttcactgcgctggtcatgtccgtgtgcaggag
cgcagcgagggttcgggagactctggctttaaagagccccctctgacctaccttgtgctc
atctgtgaccccattcctcatccttcaaacattgaggttcctctggacagcaagaccttc
cttagccgtcacactctggacatgaagttctcgtactgcgatgaaaggatcactgagctg
atgggatatgagccagatgatctgctgaacaggtctgtgtacgaatactatcatgccctg
gattcagatcacctcaccaagacacatcacaacttgtttgcgaagggccaggctaccaca
ggccagtaccgcatgatggctaagaaaggtggttttgtgtgggtggagactcaggccacc
gttatctacaatcccaagaattcacagccacagtgcattgtgtgcgtcaactacgttctc
agtggcattgtggagggggacattgtcctgtccctgcagcagaccatgacagagcccaag
gctgttgagaaagagagccataaaatcgaagatgaggtctctgaggtggacatgctcaaa
ctcttcaagccagaaaacctgaagtgtcccatggagtgctctgacctttatgagcagctg
aaagaggaacctgaggccctcactgtgttggcgcctgcagcaggagacaccatcatctct
ctggacttcaacaactcagactctgacatgcagctgacgaaggatgtgcccgtctacaat
gatgtcatgctgccctccagcagtgagaagctgcccatcagtctgtctgctctggcaacc
agtgaccccaccccagctctgtccaaacttgagaccggagcggaagacttccctttcagc
tctgcctctgatcatgttccagactccgcaaacacaccctccacatctggactcggctcc
tcagggcctaacagccccatggattactgtttccaagtggactcagacattagttctgaa
ttcaaactggacctggttgaaaaactttttgctattgataccgaagcaaagacccccttt
accaaccagggcatagaggatctcgacctagagatgctggctccatacatcccaatggat
gacgacttccagctgcgcaccccctctccattggatccgctcccctccagctctctctct
gtttctgccatgagctccctgttccagcccttaccctcccctggatctccagcctcttcc
tccagcagcgcagtgaagaaggagccatcgtcacgggccccttcgcccttgcatcttctg
caggaggtgtgcagtgctcctgtctcacccttcagcggcagtcgggacacttctcccact
cgatcccccaccccacagagcagcaatcagctcaataacagagagctgtctccaaagatg
ttagccatccagaatatccaacgtaagagaaagctggaggaagtgacatcactttctgag
gctgttggactgggtgctttgcttcagagtgtggacagtgctatagagcctggaaaaagg
gcaaaggttttagaagttaaaggatcgagtgtgctcgggggaaacagaaccattcttata
ctgccctctgatgtggccagtcgtctgttatgcagttctttagagagcagcggtgggctg
cctcagctaacacgttacgactgcgaagtcaacgctcccgtgcaggaccgccatcatctg
ctccagggagaggagctcctgcgtgctctggaccaagtcaactga
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