Megalobrama amblycephala (Wuchang bream): 125277978
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Entry
125277978 CDS
T08212
Symbol
brf1b
Name
(RefSeq) LOW QUALITY PROTEIN: BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125277978 (brf1b)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125277978 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Nicastrin
Motif
Other DBs
NCBI-GeneID:
125277978
NCBI-ProteinID:
XP_048062599
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All DBs
Position
LG11:20096550..20188749
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AA seq
695 aa
AA seq
DB search
MSRQCKNCGGADIDTDPARGSAVCTACGSVLEDNIIVSEIQFVENSGGVSSAVGQFVSAD
GTSKAPVLGSGFHTSLGKESRAQTLQNGKRQIHNLGSQLQLNQHCLDTAFNFFKMVVSKH
LTRGRKMTHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPAV
DPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHE
FRRTVKEVISVVKVCEATLRKRLTEFEETPTSSLTIDEFMRVDLEQECDPPSFVAGKKKL
KMQQLEQELVKKLEEYQGEINSYRDEIETQLAGSSRTKLRGIYSSYAREDDDCVSLASGV
TGDEDPEDEEMEAAAQHLNQEFFSQVLEQGDQGGMEDQEGSKDTVPLSSQSTHVPLTALL
GPLPSAASLGLTDSIRECIAEETTNMEDKSDNGELDLDGIDEDEIEKVLHLNEIEVEAKT
ELWMKQNEEYLREQKEKEERIAKEKEQGTYKEKPKKPSKKREPILASTAGEAIEKMLEQK
KISSKINYDVLWDLNSKGSGSSTTQQAEDVPAGGSGRKKLTRRKKQPNKSNLGLAKPASL
MGKRLRPLISSTPKKKRTTATPVTPSITTMLPPAAPXPPPAPTPPPVLEIGPVAYEEPAE
EEEEIEEEVEESCVSAMELIGGNDYGCEAEEEEIF
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcagtgtaagaactgtggtggagcagacatcgacacagacccagcccggggt
agtgcagtctgcacagcctgtggttcggttctggaggataatatcatcgtatctgagatt
cagtttgtggaaaacagcggaggggtgtcttcagcggtcggccagtttgtatccgcagat
ggtacttccaaagctccggtcctgggcagtgggttccacacaagtctgggaaaagaatca
cgagctcagacgctccagaacgggaaacggcagatacacaacctcggcagccagctgcag
ctgaaccagcactgcctagatacggcctttaatttcttcaagatggtggtgagcaagcac
ttgacacgagggcgaaagatgacacacgtcatagccgcctgcctctacctggtctgcagg
acagagggaactccacacatgctcctggacctgagtgatcttttacaggttaatgtttac
attctgggaaagaccttcctcctgttggctagagagctctgtatcaacgccccagccgtc
gatccgtgtctgtacattccacgattcgcccacatgttggagtttggtgaaaagactcat
gaggtttcgatgactgctctcagactgctgcagaggatgaaaagagactggatgcacaca
gggcggcggccatcaggcttgtgtggtgcagctctgctcgtggcagctcgtatgcatgaa
ttccgtcgtactgtgaaggaggtgatatctgtcgtcaaggtgtgcgaggccacgctgaga
aaaagactgacagagtttgaggagacccccaccagttccctgaccattgatgagtttatg
cgagtggaccttgagcaagaatgtgatcctccatcttttgttgctggaaagaaaaaactc
aagatgcagcagctggagcaggagttggtcaagaaacttgaggaatatcaaggtgagatc
aactcataccgcgatgagattgagacacagctggcagggagcagcagaaccaaactgaga
gggatttattcctcctacgcaagagaagatgatgactgtgtgtccttggcctctggggtg
actggggacgaagatccagaggatgaggaaatggaggcagcagcccaacatctcaaccag
gagttcttcagtcaggtgctagagcagggagaccagggagggatggaggatcaggagggg
agtaaggatacggtacctctctctagtcagtccacacatgtgcccctgacagccctcctc
ggccctcttcccagtgcagccagccttggtctaacagactccattcgggaatgcatcgca
gaggagactacaaacatggaagataaatcagataatggggaactagatctagatgggatt
gatgaagatgaaattgaaaaggtattacatttgaatgagatagaggtggaggcaaagaca
gagctgtggatgaagcaaaatgaggagtatttgagggaacagaaagaaaaagaagaaaga
atagctaaagagaaggaacaggggacctataaggagaagccaaagaagccgtccaagaag
cgagaaccaatcctggccagcactgcgggagaggccatagagaagatgctggagcagaaa
aagatctccagtaagatcaattacgatgttttgtgggacctcaacagcaagggcagcggg
agcagcaccacccaacaagccgaagacgtgcctgccggtggctctggacgcaagaagttg
acccgccgcaagaagcagccaaacaagagcaatcttgggctcgctaaaccagcaagcctc
atgggcaagaggctccgccctttgatatcatccactcccaagaagaagaggacaacagcc
acaccggtcactcccagcatcaccacaatgttgcctcctgcagccccangaccccccccg
gcccccacccctccccccgtgttggaaattgggcctgtggcatatgaggaacccgctgag
gaagaagaggaaattgaagaagaggtggaagagtcttgcgttagcgccatggagctgata
ggtggaaatgattacggatgtgaagctgaagaagaggagattttttag
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