Megalobrama amblycephala (Wuchang bream): 125277998
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Entry
125277998 CDS
T08212
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
mamb04144
Endocytosis
mamb04510
Focal adhesion
mamb04540
Gap junction
mamb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125277998 (pdgfra)
04020 Calcium signaling pathway
125277998 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125277998 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125277998 (pdgfra)
04540 Gap junction
125277998 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125277998 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mamb01001
]
125277998 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mamb04090
]
125277998 (pdgfra)
Enzymes [BR:
mamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125277998 (pdgfra)
Protein kinases [BR:
mamb01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
125277998 (pdgfra)
CD molecules [BR:
mamb04090
]
Proteins
125277998 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
Kinase-like
MBG_2
Motif
Other DBs
NCBI-GeneID:
125277998
NCBI-ProteinID:
XP_048062630
LinkDB
All DBs
Position
LG11:complement(21184280..21215544)
Genome browser
AA seq
1466 aa
AA seq
DB search
MGFLETHLVLGIVLLGVFSDVSRPWPVINSDKEEFILTPHSEFNITCSGVSRVRWLEPLP
PNSEVHSGFNHSTLVITDVVALNTRSYFCACVDQPENYTDIYIFVPDPEVPFVSEPIFET
DDLVVTIPCLATNPNSQVILRDLQSGNEVSLLYDHKMGFFGILSPGQYVCETSVNGKAVQ
SSVYTVTDDTDDDDEDQEWNINEEEAQGFYIQLRASMEDVKDGDSVNLTCETPPGKDFRQ
QWLHPQKQAREAVPIKLAFPDKVQYILKIPKASVADTGLYECAVTDQSTGQTKSISLGIT
VHESSFVEVISNGIGPVEVTSLLDEKEFTIYIDADPEPKVRWFKNGILLDDRYISTKTTH
LSGLRYENILVLHHPIEEDSGIYEVVASTGSRTSKFAFKLLVEAMYPVLPQSVLAPVMWP
QRESMEVSLHSTFRLTCRGQAELAWRSPVYLHDQTNSEKKGLFISTVTIDNATAAHTGEY
ICYYEFSNNTEETIIYIYVPDPQTPFVPSMAPFENHVLTSHDEMEIPCRVTDPSTSVSLI
HIDTDQVLPSVYDSKRGFVGLFGAGTYVCRALINGQEHDSIQYIVHGWTGGSDLRVELRA
EKKALLVGETITVDCVARGSEMLEDHWKYPGKLADRGVKTVKENKRDLEIHYTLTVSNAS
PKDSGVYVCSITDIMSNESQTKHLTITVYDHEFVHLNPVIGPVETARLDEVREFRVDIES
FPAPKVTWLKDGSILGDVAAEISSNLQKIGETSYQGVLTLIRAKAEDSGNYTIRAEIGNL
TTSYNYYLQVKVPPVIVDLMDIHHGSAAGQEVVCTVGGSPAPDVDWYICKNIKHCANDSS
QWMPLPINSTDITVEFQMNVDNHIESHLIFHHLESTIAVRCLARNDIGAVSRELKLVCSG
PHSELTVAAAVLVLLVIVVISLIVLVIIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQL
PYDSRWEFSRDSLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQA
LMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDGFLSRHTEK
GKKDLDIFGINPADESSRSYVILSFEGKGDYMDMKQADTMQYVPMLEMSEASKYSPIQRS
DYDHPPSHRQLNDSEVENLLSDDTNEGLTTVDLLSFTYQVARGMEFLASKNCVHRDLAAR
NVLLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYG
ILLWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMAKPEHASSDVYELMMKCWNSEPEKRPS
FHCLSDMVASLLPSGYKRCYERVNHDFLKSDHPAVTRVQCIDSDDDAYMGVLYKNQGKLK
DRESGFDEQRLSSDSGYIIPLPDLDPLSNEDYSKRNRHSSQTSEESAIETGSSSSMTKRE
GETLEDITLLDEMCLDSGDLVEDSFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgggattcctggagacacatctcgttttggggattgtcttactaggggtgttttcagat
gtttcaagaccttggccagttattaattcagacaaagaggaatttattctgacacctcac
tcagagttcaacatcacttgctccggagtaagcagagtaagatggctcgagccattaccg
cccaacagtgaagtgcattccggctttaatcacagtactttggtgatcactgacgttgtg
gccttaaacacgcgttcctacttctgtgcatgtgtggatcaacctgaaaactacactgat
atctacatttttgttccagatcctgaggttccattcgtgtctgaacctatttttgagaca
gacgatctggtcgtaactatcccctgcctcgctacaaacccaaattctcaagtgattctc
agagacctgcagagtgggaatgaggtttctctgttatacgaccacaaaatgggctttttc
ggcatattatcaccaggccaatacgtttgcgagacgagcgtgaatggcaaagcagttcag
agcagcgtttatactgtgacagatgacacagatgacgatgatgaagatcaggaatggaat
ataaatgaagaagaagcgcagggcttctacatacaactaagagccagtatggaggatgtg
aaagatggggactctgtcaatctcacctgcgagacccctcctgggaaggatttccgccag
cagtggctgcatccccaaaaacaggccagagaggctgttccgataaagttagctttccca
gacaaggttcagtacatcctcaaaattccaaaagcctctgtggcagacactggactctat
gagtgtgctgtaactgaccaatccactggacaaaccaagtccatcagcctggggatcaca
gtccacgagagctcttttgtggaagtaatatctaatggtatcgggccagtggaggttacg
tctcttctggacgaaaaagagttcaccatttacattgatgctgaccctgagccaaaggtc
aggtggtttaaaaatggcattctgctggatgaccgctacatctccaccaaaaccactcat
ctgagtggcctcaggtatgagaatattctggtcctccaccaccccatagaggaggacagt
ggcatctatgaggttgttgcgtcgactggctccaggacttcaaaatttgcattcaaactg
ctggttgaagccatgtacccagtgctgccacagtcagtgctggctccagtgatgtggccc
cagagggagagcatggaggtgtctctccactcaactttccgactcacgtgtcgaggtcag
gccgaactcgcttggcgcagccctgtttatcttcatgatcagaccaactctgaaaagaaa
ggactcttcatctccactgtgactattgacaatgcgacagccgctcatacaggagaatac
atctgctactatgagttcagcaacaacactgaagagactatcatctacatttatgtgcca
gatccacaaacgccgtttgtaccatccatggccccttttgaaaaccatgtgctgacgagt
catgatgaaatggagattccgtgccgcgtgacagaccccagcaccagtgtctctctgatt
cacattgacaccgatcaggttctgcccagcgtctatgacagcaagagaggtttcgttggc
ctcttcggcgctgggacatatgtctgcagggccctcattaatggacaggagcatgacagc
atacaatacattgttcacggctggacaggagggtctgatttgagagtcgagctacgagca
gagaagaaggctcttctggtgggtgagaccatcactgttgactgtgtggccagaggcagt
gagatgttggaggaccactggaaataccctgggaaactggcggatcgaggagtaaagacc
gtaaaggagaataagcgagatcttgagatccattatactctgacagtgtctaatgcctca
ccgaaagacagcggcgtctacgtctgctccatcactgacattatgagcaacgagagccaa
accaaacatctcactattacagtctatgatcatgagtttgtgcacctaaatccagtgatt
ggtccggtggagactgctaggctggatgaggtgcgagagttcagggtggacatagagtcc
ttccctgcccccaaagtcacatggttaaaggatggctccatcctgggagatgttgctgca
gagatcagctccaacctccagaaaatcggcgagaccagttaccagggtgtgttgaccctg
atcagggctaaagcggaggacagtgggaactataccatcagggcagaaataggcaacctg
actaccagctacaattactaccttcaggttaaagttccccctgtgattgtggacctgatg
gacattcaccatggctctgctgcaggtcaggaagtggtgtgcactgttggcggctccccg
gcccctgacgtggactggtatatctgcaaaaacattaaacactgtgccaacgattcctcc
cagtggatgccgcttccgatcaactctacggacatcactgtggaatttcaaatgaatgtg
gacaaccacattgagagtcacctcattttccaccatcttgagagcacgattgctgtgcgc
tgtctggccaggaatgacattggtgccgtttcacgggagttaaagctggtgtgttcaggt
ccgcactcggagctcactgtggctgctgctgttctggtgctgctggtcattgtcgtcatc
tcactcattgtgctggtcattatctggaaacagaaaccacgttacgagatcagatggcgt
gtgattgaatcggtcagtccggatggtcacgaatacatatatgtcgatcccatgcagctt
ccatatgactcccgctgggagttctctcgggatagccttgttctgggccgtgtcctgggc
tcaggagcatttgggaaagtggtggagggcactgcttatggacttagtcgttctcaacct
gtgatgaaagtggcagtaaaaatgcttaaaccgacagcacgctccagtgagaaacaggct
ttgatgtcagagctgaaaattatgacccacctgggccctcacctaaacatcgtcaatctt
ctgggagcgtgcactaaatcaggaccaatctacattatcacagagtattgtttctatgga
gacctggtgaattacctgcataagaacagagatggttttctcagccgccacacagaaaag
ggcaagaaagatctagacatctttggcatcaacccagccgatgagagtagcaggagctac
gtcatcctgtcttttgaggggaaaggtgattatatggacatgaagcaggcagacaccatg
caatacgtccccatgctggaaatgagtgaagcttcaaaatactctcccatccagagatca
gactacgaccatcctccctctcacagacagttaaatgacagtgaagttgagaaccttctc
tcagatgacaccaatgaaggcctgacgacagtggacctcctcagtttcacctatcaggtg
gctcgagggatggagtttttggcctctaagaactgtgtacacagagacttggctgcacgt
aatgtcctgctgtctcaaggcaagatagtgaagatctgtgactttgggctggccagagac
atcatgcacgataacaactatgtctccaaaggaagtaccttccttccagtgaagtggatg
gcccctgagagtatttttgacaacctttacactacactcagtgacgtctggtcttatggc
atcttattatgggagatattctctcttggagggacgccttatcctggtatggttgtggat
tccagcttctacaacaagatcaagagcggataccggatggcgaaacccgagcatgcttcc
agtgatgtctatgagcttatgatgaagtgttggaacagtgaaccagagaagagaccgtct
ttccactgcctgagtgatatggtggcctctctgctgccctcaggatataagaggtgttat
gaacgcgtgaatcatgacttcctgaagagcgatcatcctgctgtgactcgggtgcagtgt
attgacagtgatgatgatgcatacatgggcgtgctctacaagaaccagggcaaactgaag
gaccgcgagagcggctttgatgaacaaagactcagctctgacagcggttacatcattcct
ctgccggacctcgacccgctgtcaaatgaagactacagcaagaggaatcgccatagctct
cagacgtcagaggaaagcgcaatagagacaggctctagcagctccatgaccaagcgtgaa
ggagagaccctggaggacatcaccttgctggacgagatgtgcttggactcaggagacctg
gtggaggacagtttcctgtaa
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integrated database retrieval system
