Megalobrama amblycephala (Wuchang bream): 125278091
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Entry
125278091 CDS
T08212
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125278091 (stxbp5a)
Membrane trafficking [BR:
mamb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125278091 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125278091 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_Prp19
WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
Lgl_C
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Synaptobrevin
WD40_like
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
125278091
NCBI-ProteinID:
XP_048062856
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All DBs
Position
LG11:complement(24450992..24563704)
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AA seq
1156 aa
AA seq
DB search
MCSRPPPSLAPGGKMKKFNIRKVLDGLTAVSSPSPSPQLGSKENELIPETLQSEHFQLCK
TVRHGFPYQPSSMAFDPVQKILAIGTQSGALRLFGRPGVECYCQHESGAAVIQLQFLINE
GALVSALADDSIHLWNLRQKRPAVLHSLKFNKERITFCHLPFQSKWLYIGSERGNIHIVN
VESFTLSGYTIMWNKAIELSSKAHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKRA
DYRYTYDEAIHSVAWHHEGKQFICSHSDGTLTIWNIKSPAKPIQTITPHGKQPKDGKKPE
PCKPILKVEYKTTRAGDPFMIFSGGLSYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTL
CETPYPNDFQEPYAVVVLLEKDLVVIDLAQNGYPIFENPYPMMIHESPVTSCEYLADCPV
DLVPALYSVGSRQKRQGYSKKEWPISGGNWGLGTQSYPEIIITGHADGSVKFWDASAIML
QVLYKLKTAKVFEKARCKEEKPSTEIVDEDPFAIQLMSWCPESRMLCVAGVSAHVIIYRF
SKQEITTEVVQLLEVRLQYELNDLESPEGGGDQTPAPPTPSTSPSPQTSGPQTHPSTSSN
SSDGMRDNIPCLKVRSSPLKQSPGYQVELVVQLVWVSGEPPQQISSLAINSCYGLVVFGN
SNGLAVVDYLQKTVLLNLGTMELYGSNDPYQRQLRSPRKSRQPSGGLCDINEGSATSEDR
CKSPTSVLMSNHQQFYNGGGRGAKMSRKLSLPTELKPDLVLLSVCPPRGSIPLDNRDNSF
SRSRSSSVTSIDKESREAITSFYFCETYTRKADGGLTPSLWVGTSLGTVLAISLNMPPAG
EQRLLQPVIVSPCGTLNRLKGSVLRMAFLDSTGSLLPSAFEPWYEPNAPANGEERDKVRK
RRPVSVSPSTSQELNENQYAVVCSEKQAKVIALPSQTCVFKHNITETSFVLRADVVQMNT
GICVACFCANGHIMTLSLPGLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQR
ITYSQEVCENLQEMLGELFTPVETPEAPNRGFFKGLFGGGAQSLDREELFGETGAGKAPR
SLAQHIPGPGGIEGMKGAASGIVGDLARARIALDERGQKLGEVEERTAAMMASADSFSKH
AHEMMLKCKDKKWYQF
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcccgtcctcctccgtcactcgcaccggggggaaaaatgaagaagtttaatatc
cgtaaggtgctggacggcttgacggccgtatcgtccccttctccatccccgcagctcggg
tccaaggaaaacgagctcatcccggagacgctccagtctgaacacttccagctctgcaag
actgtgcgccatggcttcccctatcagccgtcctctatggcattcgaccctgtccagaaa
atcctcgccattgggactcagagtggagctttgcgattattcggccgacccggtgtggag
tgttactgtcagcacgagagtggagcagccgtcatccagctacagtttctcataaatgaa
ggggcgctggttagcgctttggccgatgacagtattcacctgtggaacctgcgacagaag
agaccagctgtactgcactcactcaagttcaacaaggagaggataacgttctgtcatctg
cccttccaaagtaaatggttgtacattggctcggaacgaggaaacatccacattgtgaat
gtggagtcctttaccctctcaggatacaccatcatgtggaacaaagccattgaactgtcc
tccaaggcccaccccggcccagtggttcacattagtgacaatcctatggatgagggcaag
ctcataataggatttgagtctgggatcgtggtgctgtgggatttgaaatcaaagagagct
gactaccggtacacttatgatgaggcgatccattctgtggcctggcaccacgaggggaag
cagtttatctgtagtcactcagacggcacactgaccatatggaatataaagtccccagcc
aagcccatacagacaatcacgccacacggaaagcagcctaaagatggaaaaaagccagag
ccttgcaaacccattcttaaagtagagtacaagaccacgagagcaggggatccgtttatg
atcttctctggaggtttgtcatatgacactgttggtcgacggccttgcttgacggtaatg
catgggaagagcactgcagtattggagatggactatcccattgtagatttcctcaccctg
tgtgaaacgccatatcctaacgattttcaggaaccatatgctgtagtagtcctcctcgaa
aaggatttagttgttattgaccttgcacaaaatggttaccctatctttgaaaatccatat
cccatgatgattcatgagtctcctgtgacgtcttgtgagtacttagccgattgtcctgtg
gacctcgtacctgcactttactctgtcgggtctcgccagaaacgacagggctacagcaaa
aaggaatggcctatcagtggcggaaactggggcctgggcacacaaagctaccctgaaata
ataataactgggcatgcagatggttcagtgaagttctgggatgcttcagcaataatgctc
caggtgctgtacaaactgaagacagcgaaggtatttgagaaggcacgctgtaaggaggag
aaacccagcacagagattgtggatgaggacccgttcgccattcagttgatgtcttggtgt
cccgagagccgcatgctttgtgtggctggggtctctgcccacgtcatcatatacagattc
agcaaacaggaaatcaccacagaggtggtgcagttactggaagtcaggttacagtatgag
ctgaatgatctagagtctccagaagggggaggagatcagacaccagctcctcccacacca
agcacctcccccagtccacaaacctccggccctcagacacacccttccactagcagcaac
tcttcagacgggatgcgagacaacataccctgcctcaaggtgcgcagcagtcctctgaag
cagtctcctgggtatcaggtggagctggtggtacagctggtgtgggtcagtggagagccg
ccccagcagatcagcagccttgccatcaactcctgctatggcttggtggtgtttggcaat
agcaacggtctggcagtagtggattacttacagaagactgttctgttgaatctgggaact
atggaattgtacggatctaatgacccataccagagacaactgcgttctccccgcaagagc
cgacaaccttctggagggctttgtgacattaacgaaggctcagccacctcggaggatcgc
tgcaaatcccccacctcagtcttgatgtcaaaccatcagcaattctacaatggaggaggg
agaggagcaaagatgtcacggaaattaagcttgcctactgagctaaagccagacttggtc
ctactctctgtatgtcccccacggggttccatacccctagacaacagggacaactccttc
agccgctcgcggagctccagcgtgaccagtattgacaaggaatcacgagaggccatcaca
tctttctatttctgtgagacgtacacacgcaaagcagatggcgggcttacacctagtctg
tgggttggcacgtccttgggcacagtcttggccatctccctcaacatgccccctgctgga
gagcagaggcttctgcagccagtcattgtctccccttgtggcactcttaacaggttgaag
ggtagcgtcctccggatggccttcttagattctacagggtctctcctcccctctgctttt
gagccatggtatgaacccaacgctccagccaatggagaggagcgggacaaggtccgtaag
agacggccggtgtctgtatccccatccacatcccaggaactgaatgaaaaccagtatgcc
gtggtgtgctctgagaaacaggccaaagtcatagccctaccctctcagacctgcgtattc
aaacacaacatcaccgaaacatcttttgtgctgcgggcagatgtggtacagatgaacact
ggcatttgtgtggcctgcttctgtgccaacggacacataatgaccctcagtctgccaggg
ttgagaccattgctggatgtaaattacctacccctgacagatatgaggatagcgagaacg
ttctgcttcagcaacctcggccaggccttgtacctgacctcccctactgagatccagagg
attacctacagccaggaggtctgtgagaacttacaggagatgctaggtgagctgtttact
ccggtggagacgcctgaagctcctaacaggggcttctttaagggtctttttggaggagga
gcacagtctctagacagagaagagcttttcggcgagacaggagccggaaaagcaccacgc
agtctggcacagcacattccaggtcctgggggtatagaaggcatgaagggggcagcatca
ggcatcgtgggtgatctagctcgagctcggatagcgttggatgagagagggcaaaaacta
ggcgaggtggaagagcggacggcagccatgatggccagtgctgactcattctccaaacac
gctcatgagatgatgctaaagtgtaaggataagaaatggtaccagttctga
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