Megalobrama amblycephala (Wuchang bream): 125278359
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Entry
125278359 CDS
T08212
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125278359 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125278359 (trim54)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125278359 (trim54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
CYP38_PsbQ-like
Sina_RING
SpoIISA_toxin
EFR3_ARM
zf-RING_10
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
125278359
NCBI-ProteinID:
XP_048063417
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All DBs
Position
LG11:complement(31982422..32008767)
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AA seq
357 aa
AA seq
DB search
MNFTLDFKAGMGDSMENLEKQLICPICLEIFTKPVVILPCQHNLCRKCANDVYQASNSFW
QNRSSTTVSTAGRFRCPSCRHEVILDRHGVYGLQRNLLVENIIDIYKSETNRPLLPKTEQ
QQLMCDQHEEEKINIYCLTCETPTCSMCKVFGAHKDCDVAPLTVIYKRQKTELSDAIAVL
VAGNDRIQALISQMEDICRTVKENGRRQMQNISDKFDELFAIIEERKRELIETVGREQDR
KLGHVRSLMRRHGDHLEMSIKLVETAIQSMEEPQMAVFLQSAKEVFKKITDTAKASNIEQ
TEAGFESMDHFIINTENAADMLRGIDFQTAEDGEDSSDEAPEDLTNSPGQSGESGRL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcactttggacttcaaagcagggatgggagactcaatggagaacttagagaag
cagctcatttgccccatctgtctggagatattcactaagcctgtggtcatcttaccctgc
cagcacaacctctgtaggaagtgtgccaatgatgtttaccaggcctctaactctttttgg
caaaaccggagctctaccactgtgtctacagcgggacgtttccgctgcccatcttgtcgc
catgaagtgatattggaccggcatggtgtatacggccttcagaggaacctgctagtggag
aatatcattgatatctacaaatcagagactaacaggccactcctgcccaaaacagagcaa
cagcagctgatgtgtgaccagcatgaggaagagaagatcaacatctactgcctcacctgt
gagacaccgacatgctccatgtgcaaggtgttcggggctcacaaggactgtgatgtggcc
ccgttgacggtcatctacaagagacaaaagacagagctaagtgatgccatagccgtcttg
gtggcaggaaatgacagaatacaggccctgatctcacagatggaggatatttgtaggact
gtcaaggaaaacggtcggcgacagatgcagaacatctctgataagtttgatgaacttttt
gccatcatagaagagcgtaaaagggaacttatagagactgtcggccgtgagcaggaccga
aaactgggccacgtccgctcccttatgcgtcgccacggagaccacttagagatgtccatc
aaactggtggaaacagccatccagtccatggaggaacctcagatggctgtgtttctgcag
agtgcaaaggaagtgttcaagaagatcacagacactgccaaggcctccaacattgagcag
acggaggcaggctttgagagcatggaccacttcatcatcaacacggagaatgcggccgac
atgctgagaggcatcgacttccaaacagctgaagatggagaagacagcagtgatgaagct
cctgaagacctgaccaactcacctggtcagagtggtgaatcagggagactctaa
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