Megalobrama amblycephala (Wuchang bream): 125278389
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Entry
125278389 CDS
T08212
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04517
IgSF CAM signaling
mamb04520
Adherens junction
mamb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125278389 (afdna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
125278389 (afdna)
04530 Tight junction
125278389 (afdna)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
RA_2
PDZ_6
PDZ_2
RASSF8-10_RA
RA_3
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
125278389
NCBI-ProteinID:
XP_048063471
LinkDB
All DBs
Position
LG11:complement(32639918..32772108)
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AA seq
1940 aa
AA seq
DB search
MGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIRV
SSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKDD
REGRFVLKNENDIMPKRALTNGPEKEKEGVIQNFKRTLSKKEKKKEKKREKEAFSRIPDG
DDHTLNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSGDGR
PDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALEKYGLEKENPRDYCIAQVIHA
NDKPVKETILDDTDCPLQILRDWTSDKEALVFQLKKRPPDYVPRKGRKPDTRMGQHGSIP
PEKLPYLVELSPGRGSHYAYYYRHHEDGSDSRDKPKLYRLQHSLTEVGSERSEDGSIQLF
GPGILPHHCDLMHADGLVTVTPVSLDAETFVDGQRISDTTVLRSGVTVQFGATHVFKFVD
PSYDHSMSKRDPGPMMKSRHKSGSVPETTFDLHGDIHSGSALPTSKSSGKLEMERSGNNS
ERGLVKPMIRGEQQDFSKHDGRSQDGPELTLPASIEFRENSEDAFLSAIINYTNSSTVHF
KLSPTYVLYMTCRYVMSSQYRPDISPSERTHKVIAIVNKMVSMMEGVIQEIAEGDQKQKN
IAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVHCLQSDLNNYMP
AFLEDPDEQNPQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLV
TEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDV
QNINNTCFKLNSLQLNALLSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQL
EEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLEPLCQRGFCRLIPHPRSPGTWTIYFEG
ADCDSHFSADTSELPMRKEPEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGA
ADMDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQ
PSPMMPRGSDRGRGDKGKLRPKSEGFELYNNSVQNGSPESPQGTWDTYPEPKKEDRLLKN
RADHRSSPNVANQAQSPGGKPVYPGAPGKITSVSTGNLCPDEEPSPPRPEAYPIPTQTYP
REYFTFPASKSQDRMGPGQPWQNNEPEPLPPMDNHSNNSMAMQRVVHSQEELCDMPGGYP
GERLRQEDLMHLQQQQREAEYQRGGGEHWNNQTSSSVESSTSSQEHLNFSSSSGSRSQGN
HKSGPGRWKTPIVPHSGPVGVSQPSRSDLPPPPPPPPAHYDYEPQPDMPLPPPPSVSQQQ
AVAAADRKKREEQQRWYEKEKARLEEERERKRRDQERKLVQIRNPAVPGPVMHNNQHGPL
PPAPQHQQMPHPQPPMPVQVPQPYLPPVQPPQPPPPQPTRPDKLSSLPRQPPQDTVIRDL
LPQQQPRTIERRDLQYITISKEELSASDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQ
ELQSKPERTAEENDRLRKLMLEWQFQKRLQESKQNEEDEEEEDDEDVDTTLIMQRLEAEK
RARQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERVKQEEERRWREEERARRETEEK
RRQEEEYYTRLEAERRRQHEEAERKLLTPDEPGLYRPPLPRDYQPPSPASTPTTNNNSAP
PPPPQRNTSYLKTQVASPDTIYTAKFVSYNDEEEEEDEEDAGLTGQVKLSATRKSYGDLP
PAQKPQPPPTARKPRPVSDGIFLSNSFQLPAAANANSTALKAGQPPLLPNKPSFIPSANS
KGFNSYTGNTTGLGSGEVYKDPREKWTKGGPDQENTIGGAPENLTFKERQRLFSQGKEVS
NKVKASRKLMELENELNIKQ
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggggagccgagaggaggagcggcggaaactcgccgacatcatcaaccactggaacgcc
aaccggctcgacctgttcgagatcagccaaccgactgaggatttggagttccatggcgtg
atgcgcttttacttccaggaccgtgtggcggggaacttcgccacaaagtgtatccgagtg
tccagcacagccaccacgcaggatgtgatcgagacgctggcagaaaagttcagacctgac
atgaggatgctgtcttctcctaaatactccctctatgaggtccatgttagtggcgaagag
aggaaactggacttggacgagaaaccactggtcgtgcagctgaactggaacaaagacgac
agagagggccgcttcgttctcaagaatgagaatgacatcatgcccaagagagcactgaca
aatggccctgagaaggagaaagagggggtgatccagaacttcaaaagaacactgtccaag
aaggagaagaagaaagagaagaagagggagaaggaagccttttccagaattccagatgga
gacgatcacacactgaaccgcgaggatggagagaactccaggttggctgctgaggtatat
aaagacatgccagagactagtttcacacggaccatttctaaccccgaggtggtgatgaag
aggagacgacaacagaagctggagaagaggatgcaggaattccgcagcggagatggtcga
ccggactcaggagggactctgaggatctacgctgatagtctgaagccaaacattccctac
aagaccatcctgctctcaactactgatatggctgactttgcagtcgccgaggctctggag
aaatatggtcttgagaaggaaaaccctagagattactgcatcgcccaggtgattcatgca
aatgataaaccagtgaaggagaccatcttagatgatacagattgccctctgcagatcctc
agagactggaccagtgataaagaggccttagtattccagctgaaaaagcgtcctccagac
tacgttccaaggaaaggacgtaagcctgacaccaggatggggcagcatggatccattcct
cctgagaaactgccctacctggttgaactgagcccagggcgagggagtcactatgcctac
tactaccgccatcatgaagatgggtcagactccagggacaaacccaaactctaccgacta
cagcacagcctcactgaggtcggatctgaacggagtgaagatggaagcatccagctgttt
gggcctgggattctgcctcaccactgtgacctgatgcatgcagacggattggtgactgtg
acccctgtcagtttggacgctgagacttttgtggatggacagcggatctctgacacaacg
gttctgcgcagtggcgtgaccgtccagttcggggccactcatgtcttcaaattcgtagac
cccagctacgaccacagcatgtccaagagagacccagggcccatgatgaagagtagacac
aaatcaggaagtgtcccagagacgacctttgaccttcacggggacattcatagtggctct
gctctccctacaagcaagagctcagggaagctggagatggaacgatcaggaaacaacagt
gaaagaggcctggtgaagcccatgatcagaggagaacagcaggactttagcaaacatgac
ggaaggtcccaggacggcccagagctcactctgccagccagcattgagttcagggaaaac
tctgaagatgccttcctgtctgccatcattaactacaccaacagctcaactgtgcacttc
aagctgtctcctacctacgttctgtacatgacctgccgttatgtcatgtccagccaatac
cggcccgacatcagcccctccgagcgcacgcacaaggtcatcgccattgtcaacaagatg
gtgagcatgatggaaggagttatccaggagattgctgaaggtgatcagaagcagaagaac
atcgccggggcactggccttctggatggctaatgcctcagagctgctgaacttcatcaag
caggacaaggatctgagtcgcatcacgctggatgcacaggatgtcctcgctcacctggtt
cagatggctttcaagtacttggtgcactgcctgcagtcggatctgaataactacatgcca
gctttcctggaagatcctgacgaacagaacccacagaggcccaagatagacgacgttctg
cacactctgacgggcgccatgtcccttctgcggcggtgcagagtcaacgcagccctcacc
atccagctgttctctcagctcttccacttcatcaatatgtggctctttaacaagctggtg
actgaggctgactcgggcctgtgctcgcactactggggtgccatcctacgacaacagctc
agccatatcgaggcatgggctgagaaacagggattggagctggctgcagactgtcacctc
agccgcatagtccaggcaacgaccctcctcacaatggacaaatactccatgcaagacgtg
cagaacataaacaacacctgcttcaagctcaactctttgcagctcaatgctctgctgagc
aactaccactgtgctcccgatgaaccctacattcctcctgagctgatcgatcacgtggtg
gctgtggcagagaacacggcggacgaactggcccgaagtgatgggcgggaagtacagcta
gaagaggaccctgacctccagctgcctttcctactgcccgaggatggctactcgtgcgat
gtggtgcggaacattcccaacggattccaagagttcctagagccactttgtcagagaggt
ttctgtagattgatcccgcatccacgctctccaggaacttggaccatctacttcgaagga
gccgattgcgacagtcatttctcagctgacacatcagaactgccaatgcggaaggaaccg
gaaattgtgaccgtgactttgaagaaacacaatgggatgggcctcagtattgtggcggcc
aagggtgccgggcaggacaaacttggtatttacatcaagtctgttgtcaaaggaggtgca
gcagacatggatgggcgtctggctgccggagatcagttgctcagcgtggatggacgaagt
ttggtcggtctctcacaagagagggcggcggaattgatgacacgaacaggctcggttgta
acgctcgaggtggccaaacagggagccatttaccatgggctggccacgctcctcaaccag
ccgtcccccatgatgccccgtggatcagaccgtggacgtggagacaagggaaagttgaga
ccaaagagtgagggctttgagctctacaacaactctgtgcagaatggctctcctgagagc
ccccagggcacgtgggacacctatcctgaaccaaagaaggaggacaggttgttgaagaat
cgtgcagaccaccgctccagcccaaatgtggctaaccaggctcagagtccaggtgggaag
cctgtttaccctggagccccaggaaagatcacgtcagtctcaacgggaaacctctgccct
gatgaggagccctctccaccccgtccagaggcgtatccgatccccactcaaacataccca
agggagtacttcaccttcccagcctccaaatctcaggacaggatgggccctggccagccc
tggcaaaacaacgaaccggagcctctcccccctatggataaccactctaacaacagcatg
gctatgcagcgggtggtgcactctcaggaggagctgtgtgacatgccgggcgggtaccca
ggtgaacgtctgcgccaggaagacctgatgcacctgcagcagcagcagcgtgaggctgag
taccagcgaggtggtggtgagcactggaacaaccagacgtcctcctcagtggagtccagc
acctccagccaagaacacctcaacttttcgtcgtcctctggctctaggtcccagggcaac
cacaagagcggccctggccgctggaaaaccccaatagtaccccactctggcccagtgggt
gtctcccaaccctcccgttctgaccttccccctcctccccctcctccacccgcacactat
gactatgagccacaaccagacatgccgcttcctccaccgccatctgtttcgcagcaacag
gcggtggctgcggccgatcgcaagaagcgcgaagagcaacagcgctggtatgagaaggaa
aaggcccggctcgaagaagagcgagagaggaagagaagagaccaggagaggaagttggtg
cagattcgcaaccctgccgtccctggccccgtcatgcacaacaaccagcacggcccactg
ccacccgcccctcaacaccaacagatgccccatccacagccccccatgccagtgcaggta
ccccaaccgtaccttcctccagtccagccgccccaaccaccaccgccccaaccaactcgg
cccgataaactatccagccttccccgccaaccaccacaggacacggtaatccgtgacctc
ttgcctcagcagcagccacgcaccatcgagagacgcgacctgcagtacatcaccatcagc
aaagaggaactgtccgccagcgacagcctgtcgcccgacccctggaagagggacgcccgc
gagaaactggagaaacagcagcagcttcacatcgtggacctcctagacaaggagatccag
gagcttcagtccaagcccgagcgcacggccgaggagaacgaccgtctgcgcaaactcatg
ctggagtggcagttccagaagagactgcaggagtccaagcagaacgaggaagatgaggag
gaggaggatgatgaagatgtagacaccacactaattatgcagagactggaggcggagaaa
agagcacggcagactgctgttccagcaatctctgtactagacttgctacaggacgaggag
cgacgacggaaacagcagttggaggaaatccgtaagcgtgaggcagaagagagagtcaaa
caggaggaggagagacgctggagagaggaggagagagccagacgagagaccgaggagaag
aggagacaggaggaagagtactacacccgcctggaggcagagcggcgccggcagcacgag
gaagccgagcgtaagctgctaacgccagacgagcctggtctgtacagacccccccttccc
cgggactaccagcccccttcacccgcaagcacccccaccactaacaacaacagcgcccct
ccgcccccgcctcagagaaacacctcctacctcaaaacccaggtcgcctccccagacacc
atatacactgccaagtttgtctcgtacaatgatgaggaggaggaggaggatgaggaggat
gcaggcctaacaggtcaggttaagctctcggccacccggaagtcctacggtgaccttccg
cccgcccaaaagccccagccgccgccaaccgcgcgcaagccccgtcctgtctcagatggc
atctttctgtccaactcattccagctgcccgcagcggccaatgccaacagtactgctctc
aaggcagggcagccccctctccttcccaacaaacccagcttcatcccatcagccaactcg
aaaggatttaattcgtacactggaaacacaacaggactaggatcaggagaagtttacaag
gacccgcgagagaaatggacaaaaggcggccccgatcaggagaacacaataggcggagct
ccggaaaatctgacatttaaggagcgccagagactcttctcacagggaaaggaagtgtcg
aataaagtgaaagcgtcccggaagctcatggaactggagaacgaactgaacataaagcag
tag
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integrated database retrieval system
