Megalobrama amblycephala (Wuchang bream): 125278714
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Entry
125278714 CDS
T08212
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125278714 (hmbox1b)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
125278714 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_31
DUF494
HTH_37
HTH_26
RAP1
Herpes_pp85
Motif
Other DBs
NCBI-GeneID:
125278714
NCBI-ProteinID:
XP_048064015
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Position
LG11:40709047..40724879
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AA seq
462 aa
AA seq
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MSHYTDEPRFTIEQIDLLQRLRRTGMTKPEIVHALDTLERLDREHGDKFGRRGPSDSNAT
NSTTSSTTPTSNNASSATMATSSTTSTATQTQFHGNLSPSPNNSYATSPPAVLPSPVSLV
AMVQNGRDALAATPNGKLSPNRCPVNSAAAMRSYGLEGSEEDLDIDDKVEELMRRDSTLV
KEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPG
ATLNMRPTPVSLDEMEWRQTPPPISSTPGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATIL
ESHGIDVQSPGGHSNSDDVDANDYNEQGCDVTYFEKRSVNRPFGYYRLEPTSPTQDDAGN
HADHQDPISLAVEMAAVNHSILALSRPGGVASEIKTEALDDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacacagatgagccacgcttcaccatcgaacagatcgacctgctccagaga
ctgcggcgtacaggtatgaccaaacctgagatagtgcacgccctggacaccctggagcga
ctcgaccgcgagcacggggacaaattcggccggcgcggcccgtcggactccaacgccacc
aacagcaccacctccagcactacacccacctcaaataacgctagcagcgctactatggca
acttcctccaccacttccacagcgacgcagacgcagttccatggcaacttatcgccgtcg
cccaacaacagttacgccacgtctccacctgcggtcttaccctcgcctgtctctctggtt
gccatggtgcagaatgggcgggacgctttggcagccacacccaatgggaaactatcaccg
aaccgttgcccggtaaacagtgcggcggcaatgaggtcgtacgggctggaggggtcagag
gaggacctggatatagacgacaaggtggaggagctcatgaggcgggacagtaccctggtg
aaagaggaaatcaaagcctttctgggcaacagacgcatctcacaggctgtggtggctcag
gtcacaggcatcagtcagagcagaatctctcactggctcctccagcagggctcagatctc
agcgaacagaagaaacgagctttctaccgctggtaccagcttgagaagaccacgccaggt
gccacactaaatatgcgacccacccctgtatctctggatgagatggagtggcgtcagact
ccgccccccataagctccacccctggaagcttccgtctgcgcagaggcagtcggttcacc
tggaggaaggaatgtctcgctgtgatggagagttatttcagtgataatcagtatccagat
gaagccaaaagagaggagatcgccaacgcctgcaatgctgttattcagaaaccaggaaag
aagttgtctgacttggaaagagtcacgtccttaaaagtgtacaactggtttgccaatcga
cgcaaagagatcaagaggagggccaatattgggtcttttttccaagaagccacaattctg
gaaagccacgggatagatgtgcagagtcctggaggacactccaacagtgacgacgttgac
gccaacgactacaatgagcagggttgtgatgttacctattttgaaaagagaagtgtgaac
agaccttttggttactaccgtctggagcccacctcaccaacacaggatgacgccggtaat
cacgcagaccaccaggaccccatctctctcgccgtggagatggcagctgtcaatcacagc
atcctcgccctgtcccgtccaggaggcgtggccagtgaaatcaaaacagaggcactggat
gacgactga
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