Megalobrama amblycephala (Wuchang bream): 125278920
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Entry
125278920 CDS
T08212
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125278920 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125278920 (taf4b)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125278920 (taf4b)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125278920 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
125278920 (taf4b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125278920 (taf4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
125278920
NCBI-ProteinID:
XP_048064282
LinkDB
All DBs
Position
LG11:2977913..3000671
Genome browser
AA seq
834 aa
AA seq
DB search
MSETSGSDKLDDDQSRAPTEEREIINDAQTSNNEESLETALDKKRLKNSDENNNPDSASL
NGEGEQLKPNVTAAVISSTSASSEPSPKIITGPAQIRPTAPVVVGARVVTSSVQGPGGAT
SLALVPQPGRVSVSSVAISQPRVTTLTTAKGAVVTLPRISTPSQSVPMTRTPQTVPLQLP
ANFQVPQGMVLIRSDSGQLMLVSQQALAQAQAQGMLPKPASANAAAIVRPPSSQATVTAT
PIIRVSLPASSASASTNIKLNPTPGTAVQKPPTATGTTIFTPSCTTGTTIIKPAGVIGTA
IRKPSSTIVIKASQMTPNSSTSGTFNQRTNSVTATTVINTSAVKSVGKGALSSQGNAPRM
VSPNVAARSSTNTSSAPVTVTAETLENVKKCKNFLVTLMKLASSGTRSANMAQNVRALVK
GLLDGKLEAEEFTEKLYIELKSSPQPYLVPFLKRSLPAVRQLTPNSQLFIQQCGQLKPSD
SDSTKAANQNPTASVSSALKPNQPTKTAQLVIQQPKGVIVKPSLASAQVGLPAQKQTQPK
QMVLQTNTFPTGAVVRQSILQAPKTHFSQPPLPAQAHGFKDSTSGSFRDDDDINDVASMA
GVNLSEENARILASGSELVGSVIRSCQEEPFLFPSALQTRVQHIGGSLSITEVCPDVLEL
LSLATQERLRDLLEKITLVAQQRQISYKSDEDDWRYNQTNDTRSQLKFLEQLERLEKQRR
EEEEREALLRIARSRSNSEDPEQQRLKQRAKEMQQLELAQMEHRDANLAALAALGPRKRK
PLEAPGSGANQLSGSYGQFASRAPIRVTLRDLTFCMEQDPTFRHTLMLYRAFLG
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacatcgggctcagataaattagacgatgatcagtctcgtgcgccaacagag
gaaagagaaatcatcaacgacgcgcaaacaagcaacaatgaagagtcgttggaaaccgcg
ttagacaagaaaagactcaaaaactctgatgaaaacaacaacccagattcagcttccctt
aacggggaaggagagcagctaaaaccaaatgtaacagctgctgtgatttccagtacctca
gcctcatctgaaccctctccaaagatcataacaggccctgcacagatccgacccaccgct
ccagtggtcgtaggggccagggtagtgacatccagcgttcagggaccagggggggccacc
agtttggctctggttcctcagcctggaagggtgtctgtgagctccgtggccataagccag
cccagggtcaccacactgaccacagccaaaggggcggtcgtgacattgccaaggatttcc
accccatcacaaagtgtaccaatgacacgcacccctcagactgtgccactgcagctgcct
gccaacttccaggtcccacaaggaatggtgttaatccgcagtgacagcgggcagttgatg
ttggtgtctcagcaggctctggcccaggctcaggctcagggaatgctgccaaaaccagcc
agtgccaatgctgctgctatagttagacctccatcctcacaggcgactgtaactgctaca
ccaatcatcagagtttctctcccagcttcaagtgcatcagcttctaccaatattaaactt
aaccccactccagggactgccgttcagaaaccacccactgctacagggaccactattttc
acgccatcatgtacaacaggaactaccatcattaaaccagccggtgttatagggacggcc
atcagaaagcccagctccaccattgttatcaaagccagtcaaatgactcccaacagcagc
acatcagggacctttaaccagaggactaattctgtcaccgcaactaccgtaattaatacc
tcagctgtaaagtctgtgggtaaaggtgctctctccagccagggtaatgccccacgaatg
gtgtctcctaatgtagcagccagatccagcactaacacttcatcagccccggtcactgtt
acagctgagaccttggagaatgtgaagaagtgtaagaacttcttggtcactcttatgaag
ctcgcatcgagcggcactcgctctgccaacatggcccaaaacgtccgagctcttgtcaaa
ggcctgctggatgggaaactagaggcagaagagttcactgaaaaactctacatagagctc
aaatcgtccccgcagccatatctagtgcctttcctgaagaggagcctgccagctgtccgt
cagctcaccccgaactcgcagctcttcattcagcagtgcggccaactcaagccctccgat
tcagattcaaccaaggccgcaaaccagaaccccactgcgtctgtcagctccgccctcaaa
cccaaccagccaaccaaaacagctcagctggtgatccagcaacctaaaggagtgatcgtc
aaaccgtctttggcatcagctcaggtgggcttacctgcacagaagcagactcaacccaaa
cagatggtccttcaaaccaacactttcccaacaggtgctgttgtgcggcagtccatcctt
caggcacctaaaacacacttttcccagccgccccttccagcacaggcacacggcttcaag
gacagcacctcgggctctttccgagatgacgatgacattaatgatgtggcctccatggcc
ggagtgaacctgagtgaggagaacgctcgtattttggcctctggctctgagctcgtggga
tcagtgatccgctcctgtcaagaggaaccctttttattcccatcagccctccagacacga
gtgcagcacattggtggttctctgagcatcacagaggtctgtcctgatgtacttgaattg
ctctctctggcaacacaagagagactccgagacctgctggagaagataactcttgttgca
caacaacgacagatctcttacaagtctgatgaggatgattggcgctacaatcagaccaat
gacacgcgctctcagctgaagttcctggagcaactggaaagactggagaaacagaggagg
gaggaagaagagcgagaagcactgctccgcattgcccgaagtcgctcaaacagtgaagac
ccagagcaacagcgtctgaaacagcgagccaaagagatgcagcagttggagttggcacag
atggagcacagagatgcaaatttggcagcgctggcagccctggggccccgtaagaggaaa
cctctggaggctcccggctcaggggccaaccagttgtcaggttcatatggccagtttgct
tctcgagcaccaattcgagtcactttgagagatctgaccttctgcatggagcaagacccc
acgttcagacatactctcatgctgtatagagcgttcctaggctag
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