Megalobrama amblycephala (Wuchang bream): 125279337
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Entry
125279337 CDS
T08212
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125279337 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mamb03009
]
125279337 (rexo1)
Ribosome biogenesis [BR:
mamb03009
]
Eukaryotic type
Pre-60S particles
RNases
125279337 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
CRISPR-assoc_Csx19
Motif
Other DBs
NCBI-GeneID:
125279337
NCBI-ProteinID:
XP_048064826
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All DBs
Position
LG12:13472201..13483179
Genome browser
AA seq
1225 aa
AA seq
DB search
MLRSTGFFRGIDCPFYCENNNGKAGADGCSRPYCHFRHSKQRRAASGIYDIKKTKAHSAS
PNDQGYDPFSPEVVRPEKHYNGEPPSAGQGVDLGTMELELVNRAIEAVRSEMEREKKKLS
RIGDQEYEPTTSSVKRPKPSASSHQGYDPGSYQMGQASEYTPSPRSSKYTLDSENSSSNA
SAMEYVPTAVSKKSIKKVLPPPPSRVKCKYTLDNSKPTTDMEYDPLSNYSAKPTLKEQRT
LCSEGEGRKRFYPEKQGKDEEYVPTVKKPRSSPPKADVPKYTLSFSESDEESSGTEYRPT
SLSRLQRKGINIGLKQERESGLMGQQKKQVSKIDDSFSHSESDDVESQDVDRTNKKIDKK
ISVSQLKNIKSNKPKKEEKDSNKKSSKERLESSSVNKTSKNSSKKDKNQSKTVDGSSKSK
EKVRKDGTESKSNDEKNKKIVKIKSEHSQREKERGSGNIKKPKTDKPIKNDKVPSKFKDQ
KNGKLESSAKEKDKKKSSHGSGSTNSSSTKDKSKKGSSIRDHKQARETKQRNLSHVDLFG
AESAEEDDEEDERIVRKSASAFKRGSLINNKRKTSEDASSSEDDSEVDNDDGGDGDEAVD
YSCLQDEMEYDSDPMEECLRIFNESKEVKMEDKGRQAKQPSREQEEEEDEETESTLTTLF
PGQKKRVSHFKAQGKSEASLNTVPMTQRRMTAQEICYQRMQKAQQQAAQLAAAVKTASAS
TNPILGVPGEKRRVAHRPTASLPSSKPGLANASSQVLSPTRVAVNQLSVKAQTSAGILSK
TTSTAMQKRVAHTPTLKSSAMKRPVIPAEFGAKVPTNVRQRYLNIFIDECLKLSSSEQEA
FQMALEEEKVVYDRSSSKNIYLNVAVNTLKKLRSKSTPTSPALKTPAVSVNRKAQSHEGV
LGGRLAATTSYTINRSGKQQDVDLKGAILYKKLKKYAMTEEQLQEHGYPRPHPEMSGHAV
VHNLPEKKSNDPFSKICSRCGAEYKINANGSCVRKEECSHHWGRLRRNRVPGGWETLYSC
CSGAVGSPGCEVCKQHVQDGRKESLDGFVKTFSKPLPVDGNAGVYALDCEMCYTKQGLEL
TRVTVINSDLKVVYDTFVKPGSKVVDYNTRFSGVTQDDLENTTITLRDVQAVLLSMFSAE
SILIGHSLESDLFALKLIHSVVVDTAIVFPHRLGLPYKRALRNLMADYLKRIIQDSVGGH
DSSEDARACMELMIWKIKEDAKVKR
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgttgagatctacggggttctttcgtgggattgactgcccgttttattgtgagaataac
aatgggaaagccggtgcagatgggtgcagcagaccctactgtcacttcagacacagcaaa
caaagacgagccgcctctgggatatacgacatcaaaaagactaaagcgcattccgcgagt
ccaaacgatcaaggatatgatccattcagtccagaggttgtgagaccggaaaagcattat
aatggggagccaccatcggcgggtcagggtgtggacctgggcaccatggagttggagctg
gtcaatcgggccattgaggctgttcgcagtgagatggaaagggaaaagaagaagctttct
cggattggagatcaggaatatgagcccaccacgagctctgttaagagaccaaagccctct
gcatcatcccatcagggatatgatcctgggagctatcagatgggccaagcaagtgaatac
accccgtccccccgctccagcaaatacactttggactcagagaacagcagtagcaacgcc
agcgcaatggagtatgtgcccaccgctgtctccaaaaaaagcattaaaaaggtgttacct
cccccaccgtcccgtgtcaagtgtaaatacactctggataattccaaaccaacaacggac
atggagtatgacccgctgtcgaactattcggctaagccgactcttaaagaacagagaact
ttgtgttcagagggagaagggagaaagagattttaccctgaaaaacaagggaaagatgag
gaatatgttccaacggtgaaaaaaccaaggtcgtcgccacctaaggcagatgtgccgaag
tacactctaagtttctctgaatctgacgaggaaagttccggaacagaatatcggccaacg
tccctaagccgcctgcagcgcaaggggatcaacatcggcttgaaacaggaacgagagtcg
ggtttgatgggacaacaaaaaaagcaggtgtctaaaatagacgatagcttctcacatagc
gaatctgatgatgtggagtcccaggatgtggacaggacaaacaaaaagatagataaaaag
atatctgtgagtcagttgaaaaatattaaatctaataagccaaaaaaagaggagaaggac
tccaataagaagagttcaaaagaaaggctggaaagttcaagcgtcaacaagacgtcaaaa
aattcaagtaaaaaagacaaaaaccaaagtaagactgtggatggaagcagtaagtccaag
gaaaaggtgcggaaagacggaactgagtcaaagagtaatgatgaaaagaacaagaagata
gttaagataaagagtgaacacagccaaagggaaaaagagagaggaagtggcaacatcaag
aaacccaaaacagacaaacctataaaaaacgataaggtgccatccaaattcaaagaccaa
aagaatggaaaacttgagagcagtgcaaaggagaaggacaaaaagaaaagcagccatggg
agcggcagtaccaacagcagtagcactaaagataaaagtaaaaaaggcagctcgatccgt
gatcacaaacaggcaagagagaccaaacagaggaatctgagccacgtggatttgttcggt
gctgagagtgcagaagaggatgatgaggaagacgagaggatagtgaggaagtctgcttct
gcttttaaacggggaagcctcattaataataagaggaaaacctccgaagatgcgtcatcg
tcagaggatgattctgaagtggataatgatgatggtggtgatggtgatgaagcagtggac
tactcctgtctgcaggatgagatggagtatgactcggaccctatggaggagtgtctgcgc
atatttaatgaatccaaagaggtcaagatggaagacaaagggagacaagctaagcagcct
tcaagggaacaggaggaggaggaggatgaagaaacggaaagcactttaactactctcttt
cctggtcagaagaagagggtgtcacattttaaagctcaaggaaagtcagaggcgtcgctg
aacactgtgccgatgacacagcggaggatgacggcgcaggagatctgttaccagcgcatg
cagaaggcccagcagcaggcagcacagctggctgccgcagtaaagactgcgtctgcatcg
accaacccaatactgggggtccctggagaaaaacgacgggtggcacaccggccaactgcc
tccctgccctcctcaaagcctggactagctaatgccagcagtcaggtgttgtcacccacc
agggtggcggtaaatcagctttcagtcaaagctcaaacgtcggcaggcatcctgtcaaag
accacatccactgcaatgcagaagagagtggctcatacccctactctgaagagctctgcc
atgaagcgtcctgtcattcctgctgaatttggggccaaggtgcccacaaatgtccgtcag
cgttaccttaacatattcattgatgagtgcctgaagctctcttcctctgaacaggaagcc
tttcagatggctctggaggaagagaaggtggtgtatgacaggagcagcagtaagaacatc
tatctgaatgtagctgtgaacacgctgaagaagctccgcagcaagagcacacctacgtcc
cctgccctcaagaccccggctgtatctgtgaatagaaaggctcaatcccatgaaggagta
cttggtggacggcttgctgccacaaccagctacacaatcaaccgctccggcaaacagcag
gatgtggatcttaaaggtgccattctctataaaaaactgaaaaagtatgcaatgactgaa
gaacagctgcaagagcatggctaccccagacctcaccctgagatgtcgggtcacgctgtc
gtccataaccttccagaaaagaaaagcaatgaccctttttccaaaatctgtagtcgatgt
ggtgccgagtacaagataaacgctaatggcagctgtgtgcgtaaggaggagtgcagtcac
cactggggaagattacgcagaaacagagttccaggaggttgggagaccctttacagctgc
tgctctggtgcggttggttctcctggatgtgaagtgtgtaaacaacatgtacaagatggc
cgcaaagagtccttggatggttttgtgaagacttttagcaaaccgttgccagtagatgga
aatgcaggtgtctacgccttggactgtgagatgtgctacacaaagcaaggtttggagctg
accagagtgaccgtcattaactctgacctcaaagttgtgtatgacacatttgtcaagcca
gggagcaaagtggtggattacaacacacggttttcaggtgtgacacaggatgatctggag
aacaccaccatcaccctgagagatgtgcaggcggtgctgctgagcatgttcagtgccgag
tccattctaattggacacagtcttgagagtgacctgtttgcgcttaagcttattcacagt
gtagtcgtggacaccgctattgtgtttcctcaccgcctgggtctgccttacaaacgtgcc
ctgcgcaaccttatggccgactacctcaaacgcatcatacaggacagtgtgggggggcat
gactccagtgaggatgcccgggcctgcatggaactcatgatctggaagatcaaagaggat
gccaaggtgaagagatga
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integrated database retrieval system
