Megalobrama amblycephala (Wuchang bream): 125279389
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Entry
125279389 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125279389
Cilium and associated proteins [BR:
mamb03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
125279389
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NCBI-GeneID:
125279389
NCBI-ProteinID:
XP_048064981
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Position
LG12:complement(14420359..14612664)
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AA seq
1426 aa
AA seq
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MSDWKNAFERNRVIPPHSQTARQATVSSQGLQLVFKQIDGLHIKQSESPPSLQYQLRVTL
FDSGHQHFFGRTWKSGSHSVSGTSGQSGRVLFNEVVYFHTSLCLKSVVAVVELVSLSTRA
DGSQDAVGSGFGLLQLFTGRADKSITQGEGRLSLFNGTPRALLHPTLKDPLQLNAVLSVM
EGSQLLYSIQPHPALTPIMHLLPPNILVSGHDRIPGVVFSTDTGTDALRKPRLLKSFSCV
LEGLRVALFPSVEVFESDLLQLLNRDCQNTNRGAEGRSVVVQERRLLVGVHNGWGWVEKP
HVLVLEREAGGSGAAKARGASSGGSFRQTSTDKLSDGLSLRGSVELKMMRDVAFSIVFQL
QYVFSCPLVGDGQMTSTAVHRAAFMQCVRWCAWSLFSDPEGPGENVCLDLQGGALPNPWG
VMVYSAGTQQTNSGKCVIKFKFSSSVEGASCSTALKVSHRETSPPKKLLSASQDERILEP
TASSLQSSRGPALSLSQLVATSRYPTMSHTVGSPWQQQLPSLLSPSLMASAHQLSHVERP
VAGSIAHLELSVQEREGDRREEEDEMQELTFTPVHAPVITLGTHAAGSSRSTSRRSLAQL
FSSGFPQILDHQNHVAEVLDPSEPVNFDLQREETDHLLANTLILQFLAFTRVPQAGVNSD
WPSSVHFTFQLYRFPPVTTERLKLLDPEKNSKLKSNPDYPCVLSLINKDGTLSSGFPGLQ
LQYRVDPQFLKPGERGWFLRYLALHSLQIDVWDSESLMLIGSAAVELKHMLRQGRAAVQV
SHELEVITTEYLQDANFASRHDSKHSATPAISVYTTVKGILHLRLGNVGGRVSSSQSSLA
LTPSLSHVVQPSDASQGFAGGSVPALTVLQLNASNARRARRLPEIDSELARLLQSTMREV
GGATLHQQAEANEVRQRKIDRMAAVRQHEQQKATPPFQDNANITRHRAERVQHSRDLRVI
EAYRERCKTQEITNMLSQAITTKHTLYATLGTAEFFEFVLKNPFNVSQTVTIECDNPELS
VIVKSEEWRYFKDLTKTLTPLEEEMFHLKESTLTPQVYLRPKESVHIPFKYQTFICGHNF
PLQDTKSLKISRSPQMAQKHLSNTIQAKSIKVLFRGEDKKPLAICQVDVEPTPHVVDQTF
XFYHPELTFLKKAIRLPAAWDNTADGSATLHVRCSDPNVICHTTSLTPGEPQDVYLKVPG
SPSPQIRKFFITIFTDPWLASPAQIWQVYVHYLQRMDLSCVCGTLSWHSLVLHGTQTIRR
VKCYTSHPLELQVDPDEVFALPAQGVQDIRVGLRALRPGSRFFYLNVIDVDTRQLVASWL
LCITCGQPVISKAFEISVPVDGGKGSNKKISFTNPYSSSRIFNLRTDRPDLLQFKEEQFQ
IRGGELYTIGLRFAPSQNPGTEEILIFINDKQDKNEDTYCVRVQYR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactggaaaaacgctttcgagagaaaccgcgtgatcccacctcacagtcaaacc
gccagacaagcgacagtatcttctcaaggtctacagctggtcttcaaacagatcgatgga
cttcacataaaacagtcagagtcgccaccatcactccagtatcagctgcgcgtgaccctg
tttgattcgggtcaccagcacttcttcggccgcacatggaagagcggctctcactctgtc
agtggcacgtcaggtcagagcggtcgagtgcttttcaatgaggttgtttacttccacact
tccctgtgtctgaagtctgtggtggcagtggtggagttggtgtctctgtctaccagggca
gacggttcccaggatgcagtggggtcagggttcggactcctccagctcttcacaggtcgc
gcagacaaaagcatcactcagggagagggcaggttgagtctgttcaatgggacccccaga
gccctcctgcacccaacgctgaaagaccccttgcagttgaatgctgtattatcagtgatg
gagggctctcagctgctctactccatacagccacacccagctctcactcccatcatgcac
ctcctcccaccaaacattctagtatctggacatgaccgcatccctggtgtggtgttctcc
acggacacaggcacagatgcgctgcggaagcctcgtctgctgaagagcttctcgtgtgtg
ttggagggcctacgtgtggcactcttcccctccgttgaggtcttcgaatctgacctgctc
cagctgctcaacagagactgccagaatacaaacagaggtgcggagggacgctcggttgtg
gtgcaggagcgcaggctgctggttggggttcataacggctggggttgggtggagaagcct
catgtgttggtgctggaacgtgaggccggagggagcggagcggccaaggctcgtggagcc
agctcaggcggcagcttcaggcagacctccacggacaaactcagtgatggactgtctctt
cgtggcagtgtggagctgaagatgatgagggacgtggctttcagcatcgtcttccagctc
cagtatgttttctcttgtccactggttggagatgggcagatgacatccacagctgtgcat
agagcagcgtttatgcagtgtgtgcgttggtgtgcttggagtctgttttcggatcccgag
ggccccggagagaatgtgtgcctcgacttgcagggcggtgctctccccaacccttggggt
gtcatggtctactctgcaggcacacagcagacaaattcggggaaatgtgtcatcaagttc
aagttttcatctagtgtggaaggagcttcttgcagcacggcattaaaagtgagccaccgg
gaaacgtcgccacctaagaagttactttcagcatcccaagatgaacgcatcttggagccg
acggcttcgtcgctgcagtcttcacgcggcccagcgctgtctctctctcagctggttgcg
acttcacgctacccgaccatgagccacacggtggggtctccatggcaacaacagctcccc
tctctgctctctccctccctgatggcatcggcccaccagctgtcacatgtcgagcgtcca
gttgccggcagcatagctcacctggagctgagtgtgcaagagagagagggagacagacgt
gaggaagaggatgagatgcaggagctgaccttcaccccagtgcacgcccctgtcatcacc
ctcggaacacacgctgctggctcctccagatcgacctcccggagatctttggcccagctc
ttctcctctggttttcctcagatcctggaccatcagaaccatgtggctgaggttttggat
ccttctgagcctgtcaactttgacctccagagagaagaaacagatcacctgctggccaac
actctcattctgcagttcctggcctttaccagagtccctcaagctggtgtgaattcagac
tggcccagttctgtccatttcaccttccagctctaccgcttcccccctgtcaccaccgag
cgtctgaagctgcttgacccggagaagaacagcaagctcaaatccaatcctgattaccca
tgcgtcctctcccttatcaacaaggacggcacacttagctctggttttcctggtctgcag
ctgcagtaccgagttgacccgcagttcctcaagccaggtgagcgggggtggttcctgcga
tacctggcgctccactccctgcagattgacgtctgggacagtgaatccttaatgctgatt
ggctcagctgcagtggagctgaagcatatgctgcgtcaaggccgtgcggccgtccaggtg
agccatgagctggaagtgatcactactgagtacctgcaggatgccaactttgccagcagg
catgacagcaagcacagcgccactccagccatcagtgtctacactaccgtaaaaggaatt
ctgcatctgcgacttggaaacgttggtggcagagtgtcgagttcccagagttctttggct
ctcactccatcactctcccatgtggtccagcctagcgatgcctctcagggttttgcggga
ggaagtgtccctgctttaacggttctccagcttaacgcgagtaatgccagacgagcccgg
cgattgccagaaattgacagcgagctggccagactgctacaaagcaccatgagggaagtg
ggtggagccacactgcatcagcaggccgaagcgaacgaagtgcgccagaggaagattgac
agaatggcagctgtccgtcaacatgagcaacagaaggccacgcccccttttcaagacaac
gcaaacatcacgaggcaccgggcagaacgtgtgcagcattcccgtgatctgcgtgtaatc
gaggcttatcgtgaacgctgtaaaacacaggagatcaccaacatgctctctcaggctatc
actaccaaacacactctgtatgccacactcggaacggctgagttcttcgaatttgtgctc
aagaatccattcaacgtttctcagacagtcacaattgaatgtgacaacccagagctcagt
gtaatcgtgaagagcgaggagtggagatattttaaggatttgacgaagactctgactcct
ctagaggaggagatgtttcacctaaaggagagcacactgactccacaggtttacctgcgg
cccaaagaaagtgtccacatccccttcaagtaccagaccttcatctgtggtcacaacttc
cctcttcaggatacaaaaagcttaaagatttcaagaagtccacagatggctcagaaacat
ctgtctaatacaattcaagccaaatccatcaaggtgttgttccgtggggaagacaaaaag
cctctggcaatctgccaggtggatgttgaaccgacgccacatgtggtggaccagaccttc
ngtttctaccatcctgaactcaccttcctaaagaaggccattcgcctgcctgcagcctgg
gacaacacagcagatggttctgccacccttcatgtgcgctgcagcgaccccaatgtcatc
tgccacaccaccagcctgactccaggagaaccacaggatgtttacctgaaagtacctggt
agcccaagtccacagattaggaaattcttcatcaccattttcactgacccttggctggcc
tcccctgcgcagatctggcaggtatacgtgcattacctgcaaaggatggacctgagctgt
gtgtgtggcactctgagctggcattcgctggttctgcacggcacacaaactattcgcagg
gtcaagtgctacacgtcgcatcccctcgagcttcaggtggatccagatgaagtttttgct
cttcctgctcagggagttcaagatatccgcgtaggtctgagggctctgcgccctggaagc
cgtttcttttacctcaatgtaattgatgtggatacacggcagctagttgcctcctggttg
ctgtgcatcacatgcggacagcctgtaatctccaaggcatttgaaatcagtgttcctgta
gacggagggaagggcagcaataagaaaatcagtttcacaaacccctactcttcctctagg
atattcaatctccgcacagaccgcccagacctacttcagtttaaagaggagcaatttcag
attcggggaggggagctctacaccatcggcctgcgctttgctccaagtcagaatcccggc
acggaagagattctcatcttcatcaatgacaaacaggataagaacgaggacacttactgt
gttagggttcagtacagataa
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