Megalobrama amblycephala (Wuchang bream): 125279432
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Entry
125279432 CDS
T08212
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03030
DNA replication
mamb03410
Base excision repair
mamb03420
Nucleotide excision repair
mamb03430
Mismatch repair
mamb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125279432 (pold1)
03410 Base excision repair
125279432 (pold1)
03420 Nucleotide excision repair
125279432 (pold1)
03430 Mismatch repair
125279432 (pold1)
03440 Homologous recombination
125279432 (pold1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamb03032
]
125279432 (pold1)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125279432 (pold1)
Enzymes [BR:
mamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
125279432 (pold1)
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
125279432 (pold1)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
125279432 (pold1)
MMR (mismatch excision repair)
DNA polymerase delta complex
125279432 (pold1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_exo2
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
125279432
NCBI-ProteinID:
XP_048065058
LinkDB
All DBs
Position
LG1:complement(63934285..63949974)
Genome browser
AA seq
1105 aa
AA seq
DB search
MDFKRRNGGPGLGGASQAKKGKMSTEWEDSPSQFEEELALFDEMEMEVESGEGQAGHDVI
PVGDLFSADLNPRWKRPHAPPLQPNSDRLIFQQIDLDYYLGSAVAGMPGQVQGKVPIVRM
FGVTDSGNSVCCHVHGFAPYFYVPAPNGFTNANLAEFKRELNSAVLKDMRSNKDNIAVTV
LAVDITRKESMYHYHGSRPQDFLRITMAMPRLVAPAKRLLEQGFKFANFATQGYQAFEAN
IDFEIRFMVDSDVVGCCWIELPKGKYRLREERSEGQTDSQYPGMVSLCQYEVDVAWNDLV
SHPAEGEWQRIAPLRVLSFDIECAGRKGVFPEPEIDPVIQIASMVQRQGEKEPFIRTVFT
LQNCASIVGSQILCFTQEKQLLQSWAEFVRTVDPDIITGYNIQNFDLPYLLNRAATLKVN
LFPYLGRVRGIKSVLKDSSFQSKQMGRRENKTVNMEGRVQFDLLQVLLRDYKLRSYTLNA
VSFHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMA
RVTGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEKGYYSV
PITTLDFSSLYPSIMMAHNLCYTTLLQKGQVDKLGLSPEDFIKTPTGDLFVKSSVRKGLL
PEILENLLGARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEI
SQSVTGFGRQMIEQTKQLVESRYTVSNGYQADAKVIYGDTDSVMVKLGVATVQDAMNLGR
EAADWVSSHFVPPIKLEFEKVYYPYLLINKKRYAGLYFSSNAEHHDKMDCKGIETVRRDN
CPLVANLINTCLQNILIDRDPDGAVAHAKEVISDLLCNRIDISQLVITKELTRTAQEYAG
KQAHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGVAAYMKSEDPIYVLENNIPIDTQY
YLEQQLSKPLLRIFEPILGESKAESVLLKGDHTRCKTVLTSRVGGLMAFAQKRSTCIGCR
AVLKTDAAVCDFCKKKESELYQKEIAHLSTLEEKFSRLWTQCQRCQGSLHEDVLCTSRDC
PIFYMRKKVQKDLDDQEKLISRFGW
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaaaaggcgcaatggaggccctggattgggcggggcttcacaggccaagaag
gggaaaatgagcacagagtgggaggatagtccctcccagtttgaagaggaacttgctcta
tttgatgaaatggagatggaggtggagtcaggggaggggcaagctggccatgatgtcatt
ccagtgggtgacttattctctgctgatcttaatccacgttggaaacgacctcatgcaccg
cctcttcaaccaaactcagacagactaattttccagcagatagacctggattactacctg
ggatctgcggtagcaggtatgcctgggcaggtgcagggcaaagtgcccatagtgcgcatg
tttggtgtgacggacagtggaaatagcgtgtgctgccatgttcatggattcgccccgtat
ttctatgttcctgcccccaacggttttacaaatgcaaacttggccgagtttaagagagag
ctgaattctgctgtattgaaggacatgcgctccaataaagacaacatagcagtcactgtg
ctggcagtggacatcaccagaaaagaaagtatgtatcattaccatggaagccgacctcag
gactttctgcgcatcaccatggcgatgccacgtctggttgccccagcgaagcgtctcctg
gagcagggctttaaatttgccaattttgccacccagggctaccaggcttttgaagccaac
attgactttgagatcaggttcatggtggacagtgatgttgtcggttgctgctggattgag
cttccaaaagggaagtacaggctgagggaagagagaagtgaaggacagacagattcacaa
tacccaggaatggtttccctgtgtcagtatgaggtggatgtggcatggaatgatctggtc
agtcatccagctgaaggagaatggcagaggatcgctccactcagagtcctgagctttgat
attgagtgtgctggcagaaaaggtgtgtttccagagccagagatagaccctgtgattcag
atcgcctctatggtgcagcgtcagggagagaaggagccatttatccggacagtcttcacc
ttacagaactgtgccagtatagtgggctcccagattctctgctttactcaggagaaacag
ctactgcagagttgggctgagtttgtgaggacagtggatcctgacatcatcactggctac
aatatccagaactttgaccttccatatctcctcaacagagctgcaaccttaaaggtgaat
ttattcccatatctgggccgcgtgcggggcatcaaatcagttctgaaagactccagcttc
cagagcaagcagatgggccgcagagagaacaaaaccgttaatatggagggacgtgtgcag
tttgacttactgcaggtgttgctgagggattataaactgcgctcttacacactaaacgcc
gtcagtttccattttctgcaggagcagaaggaggatgtgcagcattccatcatcacagat
ctacagaatgggaatgagcagacccgcaggcgtttggctgtatactgtttgaaggatgcg
tatctgcccctgcgcttgctgcagaagttgatgtgcgtcattaattacatggaaatggcc
agagtaactggggtgcccctgacttacctgctctctcgcggacagcagattaaagtggtt
tcacagctcctgagacaggctatgaagcaggatctggtgatgccagtggtgaggacagag
ggaggggaggactacactggagccactgtcatagaaccagagaaagggtattacagtgtt
cctataacaactctggatttctcctcactgtatccctccatcatgatggctcacaattta
tgttacactacactcctgcagaagggccaggtggacaaactgggtctgtctccagaagat
tttatcaagacccccacaggtgatctgtttgtgaagagctctgtgaggaagggccttctc
cctgagatcctggaaaacctgctgggggccaggaaaagagcgaaggcagaactgaagaaa
gagacggatccctttaaaaaacaggtgctagacggaaggcagttggctttgaagatcagt
gcgaactcagtgtacgggttcaccggggctcaggtgggcaaactgccctgtcttgagatc
tcacagagcgtcacaggctttggtagacagatgattgaacagaccaaacagcttgtggaa
tcaagatacacagtctctaatggctaccaggcagatgcaaaggtcatctacggagacaca
gactcggtgatggtgaaactaggtgtggccacggtgcaggacgcaatgaatctgggaagg
gaggcagctgattgggtctcctcccacttcgttccaccaatcaaattagagtttgagaag
gtttattacccttatctgttgatcaataaaaagcggtatgccgggctgtatttctcttcc
aatgcggaacatcatgataagatggattgcaaaggaatagagactgtcagacgagacaac
tgccctctagtggccaaccttatcaacacatgcctccaaaacatcctcattgacagagac
cctgatggagcagtagcccatgctaaagaggtgatctctgatcttctgtgtaatcgcatt
gacatcagtcagctggtcataactaaagagctgacacgcaccgcacaggagtatgccggc
aaacaggcccacgtcgagctagctgagaggatgcggaagcgtgatgccggtagcgctcca
aacctcggcgatcgagttccgtacgtcatcatcaaagcggcaaagggagtggcggcatat
atgaaatcagaggaccccatctatgtgctggagaacaacatccctatagacacacagtac
tacctggagcagcagctttccaagcctttactgcgcatctttgagcccatactgggcgag
agcaaagctgagagtgtgctactgaagggagatcacacgcgctgtaagacagtcttgaca
tccagggttggtggtctcatggcttttgctcagaaacgaagcacttgcattggctgcaga
gctgtgctcaaaactgatgcggctgtatgcgacttctgcaaaaagaaagagtcggagctt
tatcagaaagagattgctcatctgtcaacactagaggagaaattctctcgcctgtggact
caatgtcaacgctgtcaaggttcactgcatgaagacgtgctttgtaccagtcgagactgc
cccatcttttacatgaggaagaaagtccagaaagatttagacgatcaggagaagctcatt
tcccgttttggctggtga
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