Megalobrama amblycephala (Wuchang bream): 125279493
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Entry
125279493 CDS
T08212
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125279493 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125279493 (rab11fip1a)
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125279493 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Erf4
Motif
Other DBs
NCBI-GeneID:
125279493
NCBI-ProteinID:
XP_048065184
LinkDB
All DBs
Position
LG12:17029584..17058100
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AA seq
1219 aa
AA seq
DB search
MSLGDQQWYPTSVQVTVLKARNLRIKGKNGTNDAYAIMQVGKDKFSTSVAEKCVSPEWKE
EATFDLPLVHQGNAERCTLYIITMHRALVGLDKFLGQAVINLVDLHANRSRKKTDWYKLV
DKNGKQEKDRGEVLLDIQFMRNNLTASMFDLSMADKPRSGISKLKDKIRGKKKDGLSDSA
SAIVPSTVGTDSEGEEEGSSDSPKKKSKLKSFFGPKTNLQRNVSQSMSTLGTLPEKNSSL
SSSRSSGLNVDSPDVKKKFKILGHKRTDSSDSKVSLGPFSLLSRSKQNIPEQNNLCINGS
HVYAEEQEPKAAFGSTLSLNSSGKGSVEDVRKYHQRNTSDISIDSLKGLSIPSYKPEVQD
KTSLVPQSHLEGRSLSSLERRAEVVEEERGRKPEVRSLQEMLNRQEEQELRKQQERERKQ
EEERKSRLEEQEKKRKEEEELQKKRREEETQRAEEQRHQEENRVTERLSSLFGIGRKKEE
KREEAMNEPKRLDEPSSTNPFEDIPLTPDTPASVPEERSTDPRRGVRTTLTPTPPASVFP
SRTAKVSAVKPRLALSVLPETDNSYSQSPSDSVDTQSTIHASPLSPNLSTKSFESFGMFS
DLHSSLAPPKPQRTFIESSESSMENLSAPKSDKKRKAPLPPGNHRGSSKTESHPDNGGQV
HTQNSKNSQRPALPLPDYETLFPKKRHGVMSQTRWDHIIAEVNQRNWDFSEEINVDGPER
PMSNKSVVLKDRTSANLNQHQRNHEAPPPAPVRHKEAVMPPKAPATPELSFEANFQHGHI
REPIYATVNKPENSKNMENKPPPTVHSRHIPQEMERMTQTPDAITHQLSQSKEKPTPAAR
AIQNVNSKTDDAAKQVPSVKPRQQSLVKDPVKQVQPDKQVTAQPMTSENDKVEKPHKGQN
ENISTDVFVEADYLKTAEIPEERHLGKLTNEPEGKAMTAFDPFPSDDLISKDPWALPQQT
TNEVDLFTRGPKKMGNREDQASTTDKKDAFANKGKTDPFTNLSEYGTAPKLERGKQSPSF
TEQARASFQRNFSLKKKRQYTTTGKVGTENGSLGRSVSQSSQDAEDVELTVTSVASASRT
EATLVTSESPIGGKTALRAWVSPSEPQPVSSGSAVSNSRRPHPVKPLSTTESQSSSVLAV
GKDPKIITIKEMAEKPKIGESAPYTQLTQEELITLVVKQQAELSKKDARILELEDYIDNL
LVRVIEEKPAILLSLNSKC
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgggtgaccagcagtggtatcccaccagtgttcaggtgacagtgctcaaagca
cgaaacctgcggatcaagggcaaaaatggaacgaacgacgcatatgccatcatgcaggtg
ggcaaggacaagttttccacgtccgtagcggagaaatgcgtctcgcccgaatggaaggaa
gaagcgacgttcgatctgccgctggtccatcagggaaacgcggagcgatgcacgctttac
atcatcactatgcaccgagccctggtgggactggacaagtttttggggcaggctgtcatc
aacttagtggatctccacgccaacagatcacgcaaaaagaccgattggtacaagctggtg
gataagaatggtaaacaggagaaagacagaggggaagttcttttggacattcagttcatg
aggaataacctgacagccagcatgtttgacctctccatggcagacaagcctcgctccggc
atctccaagctcaaggataaaatccgtggaaagaagaaagacggcctgtcggattctgct
tctgcgatcgtgccctccacagtgggaacagacagtgaaggggaagaagagggcagttca
gactcgcctaagaagaaatcaaaactgaaatccttttttggaccaaaaacaaacctccaa
aggaatgtgtcccagtccatgtcaaccctgggcaccctgcctgagaagaacagttcactc
agcagcagcagatcgtccggccttaatgtggactctcctgatgtgaaaaagaagtttaaa
attctgggacacaagcgcactgacagctcagatagcaaagtgtctcttggccccttttct
cttctgagccgctctaaacaaaacataccggagcagaataacctctgtatcaacggcagc
cacgtttatgcagaggaacaagaacctaaagcagcttttggctccacactcagtctgaac
agctcaggaaagggttcagtagaggatgttcgtaaataccatcaacgaaatacttccgat
atctccatcgactcattgaaaggcctaagcatcccctcatacaagcctgaagtgcaagac
aaaacttctcttgtcccacagagccatctagagggcaggagcctcagctcgctggagcgt
cgtgcagaggtggtggaggaggagaggggaaggaaacccgaagtaagaagccttcaagag
atgctgaatcgacaggaagaacaagagttgaggaagcagcaagaacgagagagaaaacaa
gaggaagagaggaaaagcagacttgaagagcaggagaagaagcgcaaggaagaggaagag
ctgcagaagaagcgccgtgaggaggagacgcagcgagccgaggagcagcggcaccaggag
gagaacagggtaactgaacgcctctcctctctctttggcattggaagaaagaaggaggag
aagagagaggaagcaatgaatgaacccaaacgtctggatgagccctcttccacaaacccc
tttgaagacattcccctcacaccggatactccagcctctgtcccagaagagagatccacg
gacccacggaggggcgttaggaccaccctcaccccaacaccacccgctagtgttttcccc
agtcgcacagcaaaagtgtctgccgtcaagccaagattggctctgagtgtactgcctgaa
accgataatagctattcccaatccccttcagactctgtagacacccagagcactatccac
gcttctccactttccccaaacctctctactaaatcatttgagtcttttggtatgttttct
gatcttcattcttctttggcacctcctaaacctcagagaactttcattgaatcaagtgag
tccagcatggaaaacctctcagctcccaaatctgataagaagcgaaaggctcctctaccc
cctggtaatcataggggctcgtccaagactgaaagccatcctgataatgggggacaagtg
catacacagaactccaaaaatagtcaaaggcctgctcttcctctgccagactatgaaacc
ctctttcccaagaagaggcatggggtgatgagtcagacacgttgggaccatattattgca
gaggtaaaccagaggaactgggatttctctgaagagattaatgtagatggaccggagagg
ccgatgtcaaataaatccgtggtcttaaaagacagaacctcagcaaaccttaaccagcac
caaaggaatcatgaggcacctccacctgcccctgtgagacacaaagaagcagtcatgccc
cccaaagcccctgcaacaccagaactatcattcgaggctaatttccaacatggtcatatc
agagagcctatatatgctacggtaaataagcctgaaaactccaagaacatggaaaataag
ccacctcccactgtccatagtagacatatacctcaggagatggaaaggatgactcagact
cctgatgccattacccatcaactctcccagtcaaaagagaagcctacaccagctgccaga
gccatacaaaatgttaattcaaagactgatgatgcagctaaacaggtgccttcagtaaaa
ccaagacaacagtcattagtaaaggacccagtcaaacaagtccaaccagacaagcaagta
acagctcaacccatgacatcagaaaacgacaaagttgagaaaccacacaagggccagaat
gaaaacatttctacagatgtgtttgttgaagcagactaccttaaaactgctgaaattcca
gaagaacggcatttggggaaactgactaatgaacccgaggggaaagcaatgactgctttt
gacccattcccaagtgatgacctaatatctaaagatccctgggctttaccacagcagacc
acaaatgaagttgacctgttcacaaggggcccaaagaaaatgggaaatcgtgaagatcag
gcgtcgaccactgataaaaaagatgcatttgcaaacaaagggaaaactgatccattcaca
aatctttctgaatacggcacagcaccgaaactggagcgcggaaaacaatctcccagcttt
actgaacaagccagagcttcatttcaaagaaatttttcacttaaaaagaaacgccagtac
acaactactgggaaagttggtacagagaatggtagtctgggtagatcagtttctcagtct
tcacaagatgctgaagatgttgagctgactgtaactagtgttgcttcagcaagcagaact
gaagccaccctagtaacatctgaatcccctattgggggcaagactgctcttcgtgcttgg
gtctcgccatcagagcctcagccagttagtagtggaagcgctgtttctaattcaagaagg
cctcacccagtgaaacccttgagcaccacagagagtcagtcttccagtgttcttgctgtg
gggaaagacccaaagattatcaccatcaaggaaatggctgagaagccaaagattggagaa
agcgctccgtacacccagctcacgcaggaggaactgatcacactggtggtaaagcaacag
gctgaactatccaaaaaagatgccaggatcctcgagttagaagactacattgataacctg
ctagtacgcgtcattgaggaaaaaccggccatcctgctttcacttaattccaagtgttag
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integrated database retrieval system
