Megalobrama amblycephala (Wuchang bream): 125279571
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Entry
125279571 CDS
T08212
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125279571 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mamb04054
]
125279571 (dhx58)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125279571 (dhx58)
Pattern recognition receptors [BR:
mamb04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
125279571 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
125279571
NCBI-ProteinID:
XP_048065377
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All DBs
Position
LG1:64418058..64427939
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AA seq
681 aa
AA seq
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MAAQFTLRSYQEEVVQTALKGENSIIWLPTGGGKTRAAVYVAKKHLETRPNAKVAVLVNK
VHLVDQHFKNEFYPRLGMAYRVKAISGDSSDKDLFRCLVKDSDLIICTAQILENALNSSE
EEKHVELTDFSLLIIDECHHTQKESVYNKIMGRYVEKKVRKEGNLPQVLGLTASPGTGGN
KTLAKAVDHVLQICANLDSVIVSTKNYAPELKEVVPTPRKQYDIVEKRALDPFGDHLKLM
MSMIHEFMPSTVSRSLREVGTQEYEADVVELEKTGVKVENRLITQCALHLRQYNDALLIH
DTVRMVDAFNVLDEFYKSRSSKLLDGTDFFLQGLFDENRVELRQLALDARYENPKLAQLQ
RTLLKEFRENERSRGIIFSKTRRGTHCLYDWVNANPELQKVQISAGILTGTGTGVNHMNQ
SQQKITIKEFRVGQLNLLISTSVAEEGLDIAECNLVVRYGLLTNEIAQQQASGRARALES
VYSVVAEEGGRELRRELTNEYLTSLTAKAIDQVQSMSPREFRIKISELQQMAVLIRIEAE
RKKDARKQRYSPGQVQLQCRGCFVSVGLGEDIRKIENTHHVNIKPEFRRHYSTGGQVPLE
KTFEDWEPGRVINCSKCGKDWGMEIKFKKVAILPCLKIKSFSLNTPGGKFTHKQWKDVEF
QVTEFDFIDYMSRFSDLDLSD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacagttcactcttagatcataccaggaggaagtagtgcagacggctctaaag
ggggagaacagcatcatctggcttcccactggtggaggaaaaacccgtgctgcagtttat
gttgctaagaaacacttggagactagacccaatgccaaagtggcagtgctcgtcaacaag
gtgcatctggtagaccagcactttaaaaatgaattctaccctcgccttgggatggcatac
agggtaaaggccatcagtggagacagcagtgacaaggacttatttaggtgtcttgtcaag
gactcagacctgatcatctgcacggctcagatcttggagaacgccctgaacagctcggag
gaggaaaaacacgtggagctcacagacttcagcctgctgatcatagacgaatgtcaccac
acgcaaaaggagagtgtctataacaagattatgggccgctatgtggagaagaaagtgaga
aaagaagggaatctgcctcaggttttgggcctcacagcatcacctggtacaggaggaaat
aagacactggcaaaagctgtggatcatgtcttgcagatctgtgccaatctggattcggta
attgtgtccaccaagaattatgcaccagagctgaaggaagtcgtccctacacccagaaag
caatatgacattgttgaaaaaagagctctggatccattcggcgaccacttgaagttaatg
atgtcgatgattcatgagttcatgccatcaacggtgagccgtagcctgcgggaggtgggc
acccaggaatatgaagctgatgtggtggaactagagaaaacaggtgttaaggtagagaac
agactgatcactcagtgtgcgctgcatctgcgccaatacaacgatgctcttctcattcac
gacaccgttcgcatggtggacgcgttcaatgttctggacgagttctacaaatcaaggagc
agcaaattgctggatggaacagacttctttctccagggactttttgatgagaaccgtgtg
gagctaagacagctggcactggatgcccgctacgaaaaccccaaactggcccagctgcaa
cgcacgctgctgaaagagtttagagagaacgaaaggtctcgcggtatcatcttttcgaag
acgcgcagaggcacacactgtctgtatgactgggtgaacgccaaccctgagctgcagaag
gtccaaatcagcgctggcattctcactggaacgggtactggtgtaaaccacatgaaccag
agtcaacagaagattaccataaaagaatttagagtaggacaactcaacctcctcatctct
accagtgtagccgaggaaggacttgatattgcagaatgcaacttagttgtccgttacggg
ctgttgaccaatgaaatcgctcagcagcaggccagtgggcgggctcgagctctggaaagc
gtctactcggtggtggctgaagaaggtgggcgtgaactacgcagggaactcaccaatgag
tatctaacaagtctgaccgcaaaagctattgaccaagtacagagtatgagtcccagggag
ttcagaatcaagatatctgagcttcaacaaatggctgttctcattcggattgaagccgag
agaaaaaaggatgcgaggaagcagcgctacagtcctggtcaggttcagcttcaatgcaga
ggatgtttcgtttctgttggccttggagaagatataagaaagatcgagaatacacaccat
gtcaacatcaaacccgagtttcggaggcattatagtactggtgggcaagtgcctctggag
aaaacctttgaagactgggagcctggacgggttatcaactgcagtaaatgtggaaaggat
tggggaatggagattaaattcaagaaggtggcaatcctcccctgtttgaaaataaagagc
ttttccttgaatactcctggaggcaaattcactcacaagcagtggaaagatgttgagttt
caggtgacagagtttgactttattgactacatgagccgtttctctgacctggacttaagt
gactga
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