Megalobrama amblycephala (Wuchang bream): 125279775
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Entry
125279775 CDS
T08212
Symbol
rnf180a
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF180
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125279775 (rnf180a)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125279775 (rnf180a)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125279775 (rnf180a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
125279775
NCBI-ProteinID:
XP_048065742
LinkDB
All DBs
Position
LG12:20833788..20845475
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AA seq
395 aa
AA seq
DB search
MGSHGGEDLGRTAEALCLEVRPLQKAPLGVRLAHRKAFSLEYGHPSRGSLQGAILLTRIL
SSALPRLRSPHWTYAELHSQPAGLTSQCQRTTPPAQPPYSRAMMLSRRSDIESVRLDIIR
GSREDQEAGGSFNHRAPLMSLSSSEEEQEFGEQAGRAPAGLSVTSSLLTPTPTGERRLSK
RERKRLKSLRRRQRRRERCRQSQQQENVQSSTGNPSSSSEDEELPSRDREGYICAVCLDV
YFSPYMCHPCSHVFCEPCLRTLAKNCPTNTPCPLCRTTITHVFFQKELNHTARTFFPKEY
LSRKQNFQKASCAKWPLPSCRKLFRIFGGFQRQASPIGRRQFPHGGYRLDSFNFEDDSHG
WRFDMDMVIIYIYSVNWVIGFIIFCFFCYFFFLSF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggctcacatggaggagaggaccttgggcgtacggctgaggccctgtgcttggaggtc
aggcccctgcagaaggcccctcttggagtcagactagcccacaggaaggcgttcagcctg
gaatacggacacccatcgagaggctctctacagggggctatactcctcacgaggatactc
tcatctgctcttcccagactgcgatctccacactggacatacgctgagctccacagccag
ccagcaggcctcacctcccaatgccaaaggacaacccctcctgctcagcctccctatagt
agggctatgatgctttcgaggaggtccgatattgaatctgttaggttggatattattaga
ggctctcgtgaggatcaggaagcaggtggctccttcaaccacagagctcctctgatgtct
ctcagcagctctgaggaggaacaggagtttggagagcaggctggcagagctccagcaggg
ctcagcgtgacttcatccctgcttacacctactcccactggggaacgcaggctgagcaag
agagagaggaaacgactgaagagcctgaggaggagacagaggaggagagagcgctgcaga
cagagccagcagcaggagaacgtgcagagctctacagggaacccatctagcagcagtgag
gatgaggagctgcccagccgggatcgtgaaggctatatctgtgctgtgtgtctggatgtc
tacttcagtccatacatgtgccatccctgcagccacgtcttctgtgagccttgtctgcgg
acactggccaagaactgccccaccaacacaccctgtccattgtgcagaaccaccataaca
cacgttttcttccagaaagaactgaaccatacagctcgtacgttcttcccgaaggaatac
ctgtctcggaagcagaatttccagaaagcgagctgtgcaaaatggcctcttccgagctgc
cgtaaactgtttcgcatttttggaggctttcaaagacaggcaagtccaattggcagacgc
cagttccctcacgggggctacaggcttgattccttcaactttgaggatgattcgcatggt
tggcgatttgacatggacatggtgatcatctatatatactccgtcaactgggtcattggc
ttcattatcttctgcttcttctgctattttttcttcctctctttttaa
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