Megalobrama amblycephala (Wuchang bream): 125279923
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Entry
125279923 CDS
T08212
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03083
Polycomb repressive complex
mamb04980
Cobalamin transport and metabolism
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125279923 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
125279923 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125279923 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125279923 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125279923 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
mamb03029
]
125279923 (hcfc1b)
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125279923 (hcfc1b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
125279923 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
125279923 (hcfc1b)
MLL-HCF complex
125279923 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125279923 (hcfc1b)
Mitochondrial biogenesis [BR:
mamb03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125279923 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
125279923
NCBI-ProteinID:
XP_048066030
LinkDB
All DBs
Position
LG12:complement(5690425..5718570)
Genome browser
AA seq
1969 aa
AA seq
DB search
MASSGTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSNVAG
WDIPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGAAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMSW
ETILMDTLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQP
PSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVNPTPSLPVNSPKS
PVPAAAAPAAQSMPLSGVTLVPQVPSPTTAMPTSPLAASPRGPAILKVAAPHSTPGTSVV
TVRQATPGGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIPP
SSATTVLNVPAGATIMKTVNVTPGSTTLPATVKVASPVMVTNPATRMLKTAAAQVGTSAI
STPNTPTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPITMGSSGALISSLGK
MMSVVQTKPVQTSAVTGQAGGSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTTQAGG
TGTKPTILGISSVSPTTTNKPGTTIIKTIPMSALQQGATGVTSSTGIKSPITIITTKVVT
PGTGTPGKIITAVPKLTAGAGQQGVTQVVLKGAPGQPGTILRTLPMGGVRLVSPGTVSAG
KPTVTTLVVKGTTGVTTLGTVTGTVSTSAAGANVASANASLATPVTTLASIATLSSQVIN
PTAITVSAAQTSLATATMQSAPQPTQVTLITTPSGAEAQPAQDLPVSILASPTSEQPSTT
GADAGDGSGDAGTTVTLVCSNPPCETHETGTTNTATTASAKMGTGQVCSNPPCEMHVTGT
TNTATTASANMGRAQQVCTNPPSETHDTGTTNTATTASCNMGSKEMGTVNSKTGASSSAT
SSASGSEAATPVTESGAGSGSMRPENLRTGTTNTSTTARSNMGSDQTGTVQSSNKSQAAI
SSTLMPVCSSPTGETPETDTTKASAESGDVQQVCSNPPCETHETGTTNTATQSSSSMGSG
QTNVVQRVCSNPPCETHETGTTNTPTQASSTMGAGQSGTVQMVCSNPPCETHETGTTNTP
TQASSTMGAGQSGAVQRVCSNPPCETHETGTTNTPTQASSTMGAGQNGTVQRVCSNPPCE
THETGTTNTPTQSSSSIGAGQNGTVQMVCSNPPCETHETGTTNTATTATSSLETGEGTAQ
QGGDGQSDSGTSSEPTSSTEPANPTTQSRAITTVTQATPTPGPSVPEISSMAGSVVVAEV
PGEAEAMEQTSAEAVAAGEEPMQTECQGELGEEGAIRVVAIDESAAGDEGTMLQVHVAME
AQPGQGDQAEQMDAGVEAAEAMSLAAQDSEALALPQELMSAEGQQTTLMVTGLTPEELAV
TAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLSEGDGGQDGQQSTTIPIVLTQQELAAL
VQQQQQLQEAQAAAAQQLSAEAAAAALPTEGLAPADSLNDPASESNGHEMATAVTRAVAC
LLPRTTAETLAPSSTFAPSQPIMVASPAKMQAATALAEVANGIESAAGKQGAPPAVVKPP
VKKENQWFDVGIIKVTNTVVTHYYVPADDSAVTDDDSGAIPDYSRMKKIELSPGTAYKFR
VAGVNACGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSV
YLAIQSSQTVEAKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAAR
NEKGYGPATQVRWLQETNKDGSAAKPAAKRPVSSPDMKGAGPKKARSDQ
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaggcacctcggttctgcagccgcgctggaagagggttttgggctggtct
ggcccggttcctcgcccaagacacggacaccgagctgtggccattaaagagctgatggtg
gtgttcggcggagggaatgaaggcattgtggatgagctgcacgtctataatacagccacc
aatcagtggtttattcctgctgtccggggtgacattcctcccggctgcgctgcatatgga
tttgtgtgtgatggcaccagactccttgtgttcgggggcatggttgagtacggaaaatac
agcaacgatctttatgaactacaggccagtagatgggagtggaaacgtttgaagcccaaa
gcccccaaaaatggcccgccaccctgtcctcgcttgggccacagcttttctctagttgga
aacaaatgctacttgtttggtggactggcaaatgacagtgaagatcccaaaaacaatatt
cccagatacctgaatgacctctacacactcgagctacgcccagggtcaaacgtagcaggc
tgggacatccccattacatacggcgtgcttccccctcctcgcgagagccacactgctgtt
gtctacacagagaaaacgtccaaaaagtctcgtctcatcatctacggcggcatgagtggt
tgccgtcttggagacctctggactttagacatagatactttaacctggaacaaacctgcc
ataagtggtgcagcacctttgccccgcagtctccactctgccaccactataaccaacaag
atgtttgtgtttggtggatgggtccctctggttatggatgatgtcaaagtagccacacac
gagaaggaatggaagtgcactaacacgttggcctgcttaaatctagactcaatgtcttgg
gaaactatcctgatggacactcttgaggataatatcccaagggccagagctggacactgc
tctgtggctattaacaataggctgtacgtctggagtggaagggacggctaccgcaaagcc
tggaacaaccaagtttgctgcaaagatctgtggtatttggagacagatcgtcctcagcca
ccatcacgtgtgcagctggtccgtgccaacactaactctctggaggtgagctggggggca
gtgcctaccgccgacacttacctgctgcagctgcagaaatacgacatccctgctgcaaca
gctgccacatcgccaacggtcaaccccactccgtctttacccgtcaactcgcctaagagt
ccggtgcccgccgctgctgctcctgcagctcagagcatgcctctctctggggtcacactg
gtgccacaagtcccttcccccaccaccgccatgccaaccagcccacttgcagcctcacct
cgtggaccagctattcttaaagtggcagcgcctcattcaacccccgggacgtcagttgtt
actgtgcgtcaggccactcctggaggaaaatccccagtcacggttacatcacttcctgca
ggcgtccgcatggttgtccccgcacagagcacccaggggacgccaattggcagcagccct
cagatgagtggcatggctgctttggcagcagctgcagccgccacacagaagatcccgccc
tcttctgcaaccactgtgctaaatgttccagccggagccaccatcatgaaaacagtcaat
gttactcctggatccacaactctgcctgctactgtcaaagtagcttcacctgtaatggtt
actaatcctgcgacccgaatgctgaaaacagctgcagcacaggtcggcacttccgccatc
tctactcccaacaccccgactcggccgatcataactgtgcacaaatcaggcacagtaact
gtagcccagcaggcccaggtcgtcaccaccatggtcggaggagtcaccaaaactataacc
cttgttaagagccccatcacaatgggtagcagcggtgctctgatctccagccttgggaag
atgatgtctgttgtccagaccaaaccagtacaaacgtctgcggtcaccggacaggctgga
ggcagtcctgtcactctaatacaaacaaagactcctctgcctgctggtaccatcctgaaa
ctggtcacatctgctgatggcaagcccaccacaatcattacaactacccaagcaggaggg
actggcaccaaacctactatcctgggcatcagcagtgtctctccaactaccaccaacaaa
ccaggcaccaccattattaaaactattcccatgtctgctttacaacaaggagcaacaggt
gtgactagcagtactggcatcaagtcccccatcacaattatcaccactaaggttgttact
cctggcacgggtactccggggaaaatcataacagctgtacctaagctgacagcaggtgca
ggacaacagggggtcacacaggtggtcctgaagggggcgccaggacagcccggcactatc
ctgcgcactttgcctatgggtggagtgcgtctggtttcaccaggcactgtgtctgccggc
aaaccaacggttaccacactagtcgtcaagggcaccacgggagtcacaactctgggtaca
gtaactggtacagtatcaactagtgcggcaggggccaatgtggcaagcgctaatgccagc
ctggctactcctgtcaccacacttgcctctatcgccacattgtccagccaggtgatcaat
cccacggccatcactgtatctgctgcccagaccagcctcgccaccgctacaatgcaatcg
gcaccccagcctactcaagtaaccctgatcacaactccaagtggtgctgaagcccagcct
gcacaggatcttcctgtctccatcctggcctctcccacctcagagcagccctccaccact
ggtgctgatgctggtgacggctctggcgacgctggtaccactgtgacactggtctgctcc
aacccaccatgtgagacccatgagactggaacaaccaacacagctactacagcttctgcc
aaaatgggcaccggacaggtttgttccaaccctccatgtgaaatgcatgtaacaggcacc
accaacactgcaactaccgcctctgcgaacatgggcagagcacagcaggtctgcaccaac
ccaccctcagagacacatgatactggcaccaccaacacagccactactgccagctgcaac
atgggctctaaagagatgggcactgtgaacagcaagacaggggcttcttcatcagctaca
tcctcagcttctggttcagaagcagcaacgcccgtcacagagagcggtgctggatctggc
tccatgcggccggagaatctccgcacaggtaccaccaacacctccactaccgcccgctcc
aacatgggctctgaccagacgggaacggtccagagctccaacaagagccaagctgccatc
tcctctactctgatgcctgtttgctccagccctactggggaaactcccgagacggacacc
acaaaagcttcagctgagtccggtgacgtccaacaggtctgttcaaatccaccctgtgag
acacatgaaacgggcacgaccaatactgctacgcagtcaagctccagtatgggaagtggg
caaactaatgttgtgcagagggtatgctccaatccaccctgtgaaacacacgaaacgggc
accaccaacacgccaacccaggcttcatctactatgggtgcaggacagagtggcaccgtg
caaatggtttgttccaatccaccctgtgaaacacacgaaacgggcaccaccaacacgcca
acccaggcctcatctactatgggtgcaggacagagtggtgctgtgcagagggtttgttcc
aatcctccctgtgaaacacatgaaacgggcaccaccaacacgccaacccaggcctcgtct
actatgggtgcaggacagaatggcaccgtgcagagggtgtgttccaaccctccctgtgaa
actcatgaaacgggcactaccaacacgccaacccagtcctcgtcttctattggtgctgga
cagaacggcacagtgcagatggtgtgttccaatccaccctgtgaaacacacgagacgggc
acaaccaacacagccaccactgctacaagcagcttagaaactggagaaggaacagcccag
cagggtggtgatggacagagtgacagcggcaccagctcagaacccacatcatctacagaa
ccagccaatcccacgacacaaagcagagccatcaccacagtaacacaggccacgcccact
ccaggaccatcagtaccggagatctcgtctatggccggatctgtggtagtggctgaggtc
ccgggagaggcggaggccatggagcagaccagcgcagaggccgtagcagcgggagaagag
cccatgcagaccgagtgtcagggagagctcggtgaagagggagccatcagggtcgttgcc
atagatgaaagtgcagcgggtgatgagggcaccatgctacaggttcatgttgccatggaa
gcacagccaggtcaaggagatcaggctgagcaaatggacgccggtgtggaggctgcagaa
gcgatgagtctagctgctcaagactcagaagcgctcgctctgccccaggaactgatgtct
gcagaaggacagcaaaccaccctcatggtgactggactgaccccagaggagctggctgtg
acggcagcagctgaggctgcagcacaggctgcggctacagaagaagcgcaggccctcgct
atccaggctgtcttacaggcggctcagcaggctgtgctcagtgagggagacggaggtcag
gacgggcagcaatccaccaccatccctatagttttgacccagcaggaactcgctgctcta
gttcagcaacagcagcagctccaggaggcgcaggcggccgcagcccagcagttaagcgct
gaagcagctgcagctgctctgcccaccgaaggcttggcaccagcagacagcctcaatgac
ccagcatctgaaagcaatggccatgagatggcaaccgctgttacgagagccgtggcctgt
ctccttccgcgcactactgccgagactctagccccatcaagtacttttgcaccatctcag
ccgattatggtcgccagccctgccaagatgcaagcagcaactgctttagctgaggtggcc
aatgggattgaatcagcagctgggaagcaaggagcacctccagcagttgtgaagccacca
gtgaagaaagagaatcagtggtttgacgttggaatcattaaggtcacaaacacggttgtc
actcactattacgtgccagctgacgattcagcggttactgatgatgattctggcgcaatc
ccagactacagccgaatgaagaagattgagctgtctccaggcactgcgtacaagtttcgt
gtggctggtgtcaacgcgtgcggccgtggaacgttctctgaggtctctgcgtttaagact
tgcttacctggcttccccggagcaccgtgtgccatcaaaatcagcaagagcccagatggt
gcccacctgacctgggagcctccatcagtgacatcagggaagatcattgagtattcagtg
tatctggccatccagagctcgcagacggtcgaggcgaaagcatccactccggctcagctt
gcctttatgcgggtgtactgtgggcccaacccgtcctgcctagtgcagtcgtctagtctc
tccaacgcccacatcgattacaccaccaaacccgccatcatcttccgcatcgccgcccgc
aatgagaagggctacggccccgccacgcaagtcaggtggctacaagaaaccaataaagat
ggctctgcggccaaacctgcagcaaagaggccggtctcgtcgcctgatatgaaaggcgct
ggtccaaagaaggccagatctgaccagtga
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integrated database retrieval system
