Megalobrama amblycephala (Wuchang bream): 125279926
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Entry
125279926 CDS
T08212
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125279926 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125279926 (hdac6)
04131 Membrane trafficking [BR:
mamb04131
]
125279926 (hdac6)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125279926 (hdac6)
Enzymes [BR:
mamb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125279926 (hdac6)
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125279926 (hdac6)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125279926 (hdac6)
Membrane trafficking [BR:
mamb04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
125279926 (hdac6)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125279926 (hdac6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
125279926
NCBI-ProteinID:
XP_048066040
LinkDB
All DBs
Position
LG12:complement(5648266..5664203)
Genome browser
AA seq
1088 aa
AA seq
DB search
MDPVPVSKGSTRSPRGTPETKRENNNPNHKKSLQDARRKGRMDRSKVEEEMSNELQNLDV
RGKTKAAGTGLVYVDAFTHFHCLWDASHPECPARVSTVMETLETEGLLGRCVRVEARAVS
EDELLLVHTKDYVELMKSTQKMTEEELKTLSDKYDSVYLHPEFFTSACMAVGSVLQLVDK
VMTSQLRNGFSVSRPPGHHAQADKMNGYCMFNNLAIAARYAQKHHGVERVLIVDWDVHHG
QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGMEDG
DYITAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMRVSPQCFSILTHMLKGVAQGR
LVLALEGGYNLQSTAEGVCASVRSLLDDPCPHLTSPGAPSESALKSISKTISALYPFWKS
LQTFEGGPLSNATPLPAPVCAEVKVSSPITGLVYDQKMMHHHNMWDGHHPELPQRISRIF
SRHEELGLLSRCHRIPARLATEEELALCHSSEHISTIKSTEHMKPRDLHRLGNNYNSIYI
SNESYTCALMAAGSCFNSVQAILTGQVRNGVAIVRPPGHHAEKDTACGFCFFNTAAVTAR
YAQSITHKSLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPNSEDANYDKV
GQGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPISREFAPELVLVSAGFDAARGDPLGG
YQVTPEGYAHFTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPPLDHLPP
PKNSAAVTINNVLRAHAPFWSSLRIQIPESLRLSLPSPKPKGKRESGGKGKRSPRQSTSA
QSPGQNPQHLEQSGLDGLTEDLLSLNLNTSTSSNTSPASVAIGGARRKVKPNPQRNSTGQ
ESNSPLKPMSEKARDGDSTHAEITAVKAETPDRSFPVTGNSAAMYDQESSGLEAACGETV
TAVIEVFGTQATDVDGMHVVNPLPWCPHLESVRPVPSGGIDVFLPCEECGGDAENWICLF
CYKVLCGRYVNQHMVTHGQVSGHPLVLSFADLSVWCYACESYVHNKVLHEAKNAAHLMKF
GEEIPPFN
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttccagtttccaaaggttccactcgttctccaagaggaacaccagaaacc
aaaagagaaaacaacaacccaaaccataagaagagtctacaggacgcacggaggaagggg
agaatggatcggagcaaagtggaggaggagatgagcaatgaattacaaaacctggatgtg
cgtgggaagactaaagcagcaggaacaggtcttgtctacgtagatgccttcactcacttt
cactgcctctgggatgccagtcacccagagtgtccagcgagagtgagcactgtgatggag
acactggagacggagggtctgctgggacgctgtgtgcgagtggaggccagagctgtatca
gaagatgagctattactcgttcatacaaaggattatgtagagctgatgaaatccacacag
aaaatgacagaggaggagctgaagactctctctgataaatacgactctgtctacctgcat
cctgaatttttcacctccgcctgtatggcggtaggatcagtcctccagctggtggataaa
gtgatgacatcacagctgcgtaacggcttctctgtcagcaggcctccaggtcaccatgca
caggcagataagatgaacggctactgtatgtttaacaatctggccatagcagcgcgctat
gctcaaaaacatcatggagttgaacgagttctaattgtggattgggacgtgcatcatgga
cagggaatccagtatatttttgaagaggatcccagtgtgctgtatttctcagtgcacaga
tatgaagatggctcgttctggccgcatctcaaggagtctgacagcagctcggtgggttca
ggagcaggacagggctacaatatcaacctgccctggaacaaggtggggatggaggatgga
gattacatcacagctttccagcagctcctcctgcctgtggcgtatgagtttcagcctcaa
ctggtgttagtggcggccggctttgactctgtgatcggtgacccaaagggtgagatgcga
gtgagtccacagtgtttctccatcctgacccatatgctgaaaggtgtagcacagggccga
ctcgtgctggctctggagggtgggtataacctccagtccacagcagagggtgtttgcgct
agtgtgaggtcactgctggatgacccttgccctcacctgacctctcctggtgctccgagt
gagagtgccctgaagtccatctcaaagaccatctctgccttgtatccattttggaagagt
cttcagacttttgaggggggtcctctgtccaatgccactcccctgcccgctccagtatgt
gcagaagtgaaggtttcttctccaatcactgggctagtttatgaccagaaaatgatgcat
catcacaacatgtgggatggtcatcatccagagctccctcagagaatttcacggatcttc
tcccgacacgaggagttgggcctgctgtcccgttgccatcggataccagctcgcttagca
acagaggaagagctggcactctgtcacagttctgagcacataagcactattaagagtaca
gagcacatgaaacccagagatctgcaccgactggggaacaattacaactccatctacatc
agtaacgagagctacacctgtgccctgatggccgctgggtcatgctttaactccgtacag
gccatactcacaggccaggttagaaacggcgtggccatagtccgtcctcctggccatcat
gcagagaaagacacagcttgtggtttctgtttctttaatacggccgctgtgaccgcacgc
tatgcccagagcatcacacacaaatcgctgcgtgtcctcatcctcgactgggatgttcat
catggaaacggcacacagcacatctttgaggaggatgacagtgttctgtacatttctctg
catcgttatgaagacgggacatttttccccaactcggaggatgctaactatgataaggtg
ggtcaggggaaaggccgaggatacaatgtcaacatcccctggaatggaggaaagatggga
gacccagaatacatggcagctttccatcacttagtgatgccgatatccagagagtttgcc
ccagagctggtgctggtgtctgctgggtttgatgcggcacggggtgatccgttgggaggg
tatcaggtgaccccagagggctacgcccacttcacccatcagttgatgagtctggcagca
ggaagagtgctggtcatactggagggaggatataacctcacctccatctctgagtccatg
tccatgtgcaccagtatgttgctgggagactcccctccacctctagaccatctaccccca
cccaagaacagcgctgctgtcaccattaacaacgtcctgcgtgcacacgcccccttctgg
agctccctgagaatacagattccagaatcacttcgtttgtctttgccatctcctaaaccg
aaaggcaagcgggaatcgggtggcaagggcaagagatcgcctcgccagtccacttctgct
cagagtcccggacagaacccgcagcatcttgagcagtctggccttgatgggctcactgag
gatctgctttctctgaatctcaacacaagtacctcatctaacaccagcccagcatcagtt
gctattgggggagccagaaggaaagtgaaacccaacccacagaggaattcaacaggccag
gagtcaaattcacctctaaaacccatgtcagagaaagccagagatggagacagcacacat
gcagagattactgctgtaaaagcagagacacctgaccggtcattcccagtcactggaaat
tcagctgccatgtatgaccaggagagctctggtctggaggctgcttgtggtgagactgtg
acggcagtcatagaggtctttggaacacaagccacggatgtggacggcatgcatgtggtg
aacccgttgccatggtgcccacacttggagtcagtgcgaccggtgccctcaggtggcatc
gacgtcttcctgccgtgtgaggagtgtggaggtgatgctgaaaactggatctgcctcttc
tgctacaaggtgctctgcgggcgttatgtgaaccagcacatggtgacccacgggcaggtg
tcgggtcaccctctggtgctgagcttcgctgatctttctgtctggtgctacgcttgtgag
tcatacgtccacaacaaggtgctccatgaagccaaaaacgctgctcacctcatgaagttt
ggagaggagattcctcctttcaactaa
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integrated database retrieval system
