Megalobrama amblycephala (Wuchang bream): 125280049
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Entry
125280049 CDS
T08212
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03272
Virion - Hepatitis viruses
mamb04382
Cornified envelope formation
mamb04514
Cell adhesion molecule (CAM) interaction
mamb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
125280049 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125280049 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
125280049 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125280049 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125280049 (cldn5a)
04147 Exosome [BR:
mamb04147
]
125280049 (cldn5a)
Cilium and associated proteins [BR:
mamb03037
]
Other cilia and associated proteins
Stereociliary proteins
125280049 (cldn5a)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
125280049 (cldn5a)
Exosomal proteins of colorectal cancer cells
125280049 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
L_HMGIC_fpl
Motif
Other DBs
NCBI-GeneID:
125280049
NCBI-ProteinID:
XP_048066312
LinkDB
All DBs
Position
LG12:complement(4814270..4816857)
Genome browser
AA seq
215 aa
AA seq
DB search
MASAALEILGLILCVFGTLLEMVACGLPTWKVTAFIEANIVVAQTIWDGLWMSCVVQSTG
QMQCKIHDSMLALGHDLQAARALTVISSVMCVIGLMVVIAGAQCTNCIKTDNVKARVVNV
GGVIYIISAIFMLVPLCWMANSIISDFYNPQVPAAKKREIGSALYIGWAATAMLLLGGSM
LCCSCPASGSSGYSVKYAPTKRATPNGDYDKRNYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcggctctggagatcctgggtctgatcctgtgcgtcttcggcacgctcttg
gagatggtcgcctgcgggctgcccacctggaaggtgaccgccttcatcgaggccaacatc
gtggtggcccagaccatctgggacggcctgtggatgtcgtgcgtcgtgcagagcaccggc
cagatgcagtgcaagatccacgactccatgctcgccctcggccacgacctccaagccgcg
cgcgctctcacggtcatctcgtcggtcatgtgcgtcatcgggctgatggtggtgatcgcc
ggcgcgcagtgcaccaactgcatcaagacggacaacgtgaaggcgcgggtggtgaacgtc
ggaggggtcatctacatcattagtgccatattcatgctcgtgcccctgtgctggatggcc
aacagcatcatctctgacttctacaacccgcaggtgccggcggccaagaaacgggagatc
ggatcggcgctctacatcggctgggcggccaccgcgatgctgctgctcgggggaagcatg
ctctgctgctcgtgtccggcctctggaagctccggctactcggtcaaatacgcgcccacc
aaaagagcaacacccaacggggactatgacaagaggaattacgtttag
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