KEGG   Megalobrama amblycephala (Wuchang bream): 125280206
Entry
125280206         CDS       T08212                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125280206 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mamb03041]
    125280206 (sf3a1)
Spliceosome [BR:mamb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    125280206 (sf3a1)
 Complex B
    125280206 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    125280206 (sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 125280206
NCBI-ProteinID: XP_048066524
LinkDB
Position
LG12:31021319..31030425
AA seq 784 aa
MPPGPVQIMQPELNNKPEDQKEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQQQASQQLPQKV
QAQVIHETVVPKEPPPEFEFIADPPSIAAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRN
YQFDFLRPQHSLFNYFTKLVEQYTKVLIPPKGLLLKLKKEAENSREVLDQVRYRVEWAKF
QERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEELGARILIQE
RYEKFGESEEVEMEVESDDEEDERGGREDGRAAQLDQDTQLQDMDEGSDEDDDGMKAPLP
PDNPMPPPLPPTPDQVIIRKDYDPKASKPLPPVAAPDEYLISPITGEKIPASKMQEHMRI
GLLDPRWLEQRDRNIRERQIEEEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDDTKEKIGPSKPN
EIPQPPLPSVAPSLPKPTPPVNTVPRPTSTMAPPVRTTLLPAVPVIPRPPVAPVVRLAPG
QVLAPMPPMLHAPRINVVPMPPSGPHIMAPRPPPMVVPAAFVPAPPVPQPPSTVSAPMPP
AHPPPPHEDEPSSKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLSGQVLNF
NLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMNNGSVIHLALKERG
GRKK
NT seq 2355 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtgcagatcatgcagccggagctaaacaacaagccagaggaccag
aaagaagagactccagccacaaagcccattgtgggaatcatctatccgcctcctgaagtc
cggaacattgttgacaagactgccagcttcgtggccaggaatggacctgagtttgaggcc
cggattcgacagaatgagatcaacaacccaaaattcaacttcctcaaccccaacgaccct
taccatgcttactaccgccacaaggtcaatgagttcaaggagggcaaagctcaggaaccg
tctgcagcagtgcctaaagtcatgcagcagcaggcatcacagcagcttcctcagaaggtt
caggcacaggtgatccatgagacggtggtgcccaaggagcctccaccggagtttgagttc
attgcagaccctccctccatcgcagcctttgacctggatgtggtgaagctgaccgcacag
ttcgtcgcccgaaatggtcgtcagtttctcacacagctgatgcagaaggagcagaggaac
taccagtttgacttcctgcgaccacagcacagcttgttcaactactttacaaaactggtg
gaacaatacacaaaggttttaatccctccgaaaggtcttttgctgaaactaaagaaggaa
gcagagaattctcgtgaggtcttggaccaggtcagatatcgtgtggagtgggccaaattc
caggagcgagagaggaaaaaggaagaggaggagcgagagaaggagagggtggcctatgct
cagattgattggcatgactttgtggtcgtggagacggtggacttccaaccaaatgagcag
ggtaatttccctcctcccactactcctgaggagctgggcgctcgtatcctgatccaggag
cgctatgagaagtttggagaaagtgaggaggtggagatggaggtggagagtgatgatgaa
gaggatgagaggggagggagggaggacggacgcgcagctcagctagaccaggacacacag
ctgcaggacatggatgagggctctgatgaagatgatgatggaatgaaagctcctctaccc
cctgataatcccatgccaccacctctgccccccaccccagaccaggttatcatccgcaaa
gactacgaccccaaggcctctaagcctctgcctcccgtggccgcccccgatgagtacctc
atctcccccatcacgggtgagaagatcccagccagtaagatgcaggagcacatgcgcatc
ggcctgctggacccccgctggctggagcagcgtgaccgcaacatccgagagcgtcagatc
gaggaggaggtgtacgctcccggccttgacattgagagcagcttgaagcagctggccgag
agacgtaccgatatctttggtgtggaggaaacggccatcggtaagaagatcggagaggag
gagatacagaagcctgaagagaaggtcacatgggacggtcactcaggcagtatggctcgt
actcagcaggcggctcaggctaacatcaccctgcaggagcagattgaagccatccacaaa
gctaaaggtctagtgcaggaggacgacaccaaggagaagatcggccctagcaagcccaac
gagattcctcagccgcccttgccatcagtagcccccagtctgcccaaacccaccccacct
gtcaacactgtccccagacccacgtctactatggcacccccagtacggaccaccttgctt
cctgctgtgcctgtcatacccagacctccagtggccccagtggtacgtctggcccctgga
caagttctggcccccatgccacccatgttacatgctccacgcatcaatgtggtgcccatg
ccaccgtctggaccccatattatggcacccagaccgccacctatggtggttcctgctgcg
tttgtacccgctccccctgtacctcaacctcccagcacagtttccgcacccatgcctcct
gctcatcctccacctcctcacgaggacgagccttccagcaagaaaatgaagacagaggac
aacctgattccagaagaggagttcctgcgcaggaacaagggacctgttgcagtcaaggtt
caggtgccaaacatgcaggacaagacagaatggaagctgagtggccaagtactgaacttc
aacctgcctctcacagaccaggtgtctgtcatcaaggttaagatccatgaagccactgga
atgccggctggaaagcagaagctgcagtatgagggtattttcatcaaagattccaactct
ctggcctattacaacatgaacaatggctctgtcatccatctggcccttaaggagagagga
ggaaggaagaagtag

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