KEGG   Megalobrama amblycephala (Wuchang bream): 125280213
Entry
125280213         CDS       T08212                                 
Symbol
kdm5c
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific demethylase 5C
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mamb01009]
    125280213 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mamb03036]
    125280213 (kdm5c)
Enzymes [BR:mamb01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     125280213 (kdm5c)
Protein phosphatases and associated proteins [BR:mamb01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125280213 (kdm5c)
Chromosome and associated proteins [BR:mamb03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    125280213 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD Aida_N
Other DBs
NCBI-GeneID: 125280213
NCBI-ProteinID: XP_048066540
LinkDB
Position
LG12:31278171..31304069
AA seq 1562 aa
MDGGEEFVPPPECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVEVD
NFHFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLFSLAKIVTE
EGGFEAVSKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFEMFQSGASLPPCKPRPF
DSDEVDREYKPHSIPLRQSVPPSKMSSYGRRANRLQPEPEPTEEDIEKNPELKKLQIYGA
GPKMMGLGLVPRDKTRKKDELPQTVIVRDSAASASVKDEPGETPVTKADPDIPPPPPNLI
VKEDVDDDKSHIADPNDPGDEPCTKMTMRLRRNLNNPQFVDSFVCRMCGRGDEDEKLLLC
DGCDDNYHTFCLIPPLTDPPKGNWRCPKCVAEECKKPSEAFGFEQATREYTLQSFGEMAD
TFKADYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNGKRHL
SDEEEEYARSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYS
INYLHWGEPKTWYGVPSSAAEKLEEVMKKLTPELFEFQPDLLHQLVTIMNPNILMSHGVP
VVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPTGRSCIEHYRRLRRYCVF
SHEELTCKMAACPEKLDLNLAAATHREMFIIVQEERKLRKSLLERGIKEAEREAFELLPD
DERQCDKCKTTCFLSALACSNCPERLVCLYHAQDLCSCPSEKLYLRYRYTLDELLAMLHR
LKVRAESFDSWANRVKEALEQEEGNKIDIKDLEVLKEEAAEKKFPNNELLQRLNTVLTDI
SKCESRSTELLSSSQSSRMSLEELRTLVDTMQNLPCVMTQQEEVQAVLQXIEEFDSRAQA
LVDRSKGEWKQDSPLPAASEIQALLEEGASLPVIAPACELLSGLQEQGRWLGEVRRTLGP
EGSEVTLAVLRNLMEAGCNVPQSISVETAMAELQELLTIAERWEEKAQICLEDRQKHHLS
TLEAIVNEAQLIPVQLPNILSLQACLSRARAWVTDLEEIQNGEHYPCLDDLEGLVAIGRD
LPVKMEELKQLELQVASAHSWREKASKTFLKKNSQHSLLEVLCPCVEKSKKREENSLGTE
ADSDVNVLGLTAQDLRDPGAIVMAFKEGERLEKEALLRLQQVNLTKPGVEKGASGDQNGI
KMERKQSDSMETDTPLNSDSPVLLNGGPTPSLNPSQSVCVCSGPPRPLLHRCHLCKDWFH
GGCVPFPPLLGSSDTHLTKPLCWWDWNTRFLCPRCQRSRRPRLETILALLVALQRLPVRL
PEGEALQCLTERAINWQGRAKQALDAPELQRALERLQQVKEEMVSIKEEEPVEKKKWNGD
TVIVLSDSEETEDGVIDLTEEVNSPKKSEEKAANGTPSGCENGIARKLSTHDFTGVESLL
SLVPCLKGPVIELSTSTRAQLEELQLEGDLLEVTLDQTHTIYRILQAASQPPHDALHTLI
QIELQEQRSSGRGNKSKDSKRKRKSQKTEGGPKSTEASECKKTKPVSLTPPSDPHRDLVM
FS
NT seq 4689 nt   +upstreamnt  +downstreamnt
atggatggaggggaggagtttgttccgccgccggaatgtccagtgtttgaaccgtcatgg
gaggagtttgcagatccactgggatatatcgctaaaatccgtccgatagcagaaaagtct
ggaatatgcaagattcgccctccacccgactggcagccaccatttgctgtagaggtggac
aatttccatttcacaccacgtattcagaggctcaatgagctcgaggctgagacaagagtg
aagctcaattatctggacagaattgccaagttctgggagatccaaggatcctctctgaag
atccccaacatagaacgacgtattctagatctgttcagcttggccaagattgtgacagag
gaaggaggttttgaggcggtgagtaaggagagacgctgggcacgcgtggcacagaaactc
ggttatcctcctggaaaaaacattggctctctcctgaggtcacactatgagaggatcgtc
tatccatttgagatgttccagtctggagccagtttaccgccatgtaaacccaggccgttt
gacagtgatgaggtagaccgggaatacaaaccccactccattcctctccgccaatctgtc
ccgccatccaagatgagcagttatggacgacgagccaatcgccttcagcctgagccggag
cctacagaggaagacatagagaaaaaccctgagctgaagaagctacagatctatggggct
ggacctaaaatgatggggctgggtcttgtacctcgagacaagacacggaagaaagatgaa
ctgccacagacggtaatagtgcgggacagtgctgcctctgcatctgtgaaggatgaacca
ggagagacgccggtcacaaaagcagatccagacattccccctccacccccaaatctcatc
gtcaaggaggatgttgatgatgacaaaagtcacattgctgatcctaatgaccccggcgat
gaaccctgcactaagatgaccatgagactccgacgcaacctcaataacccacagtttgtg
gactcgtttgtatgtcggatgtgcggacgtggggatgaggacgagaagttgctgctctgt
gatgggtgcgatgataattatcacacgttctgcctgatacctcctctcacagacccaccc
aagggcaactggcgctgtcccaaatgtgtagcagaggagtgtaaaaagccatcggaggcg
tttggtttcgagcaggccacgcgagagtatacgttacagagcttcggtgagatggccgac
acttttaaagccgactacttcaacatgcctgtccatatggtgcccacagagctggttgaa
aaggagttttggcggttggttagtagtattgaagaggacgtaactgtagaatatggtgca
gacattcactcgaaagaatttggtagtggttttcccgttaacaatggcaagagacactta
tcagatgaggaagaggaatatgcccggagcggctggaatctgaacgttatgccagtgttg
gagcagtcagtattgtgccacattaatgcagatatctcgggcatgaaggtgccatggctg
tatgtgggcatggttttctccgctttctgttggcacatagaggaccattggagttactct
atcaactatttacactggggtgagcccaaaacatggtatggtgtgccatcatcagctgca
gagaagttagaggaggtgatgaagaaactcacacctgagctcttcgagttccagccagac
ctgcttcaccagcttgtcaccatcatgaacccaaatatactcatgagtcacggagtgccg
gtggttcggaccaatcagtgtgctggggagttcgtcatcacttttccacgagcttatcac
agcggtttcaatcagggatataactttgcagaagcagtcaacttctgcactgcagactgg
ctgcccacagggcgctcttgtatcgagcattaccgacggctgaggcgctactgtgtgttc
tctcatgaggaactcacctgcaagatggcggcctgcccagagaagctggatctaaacctg
gcagccgccacacacagggagatgttcatcattgtacaagaggagaggaaactacgcaaa
agcctgctggaaaggggcataaaggaagctgaaagggaggcctttgagttactccctgat
gatgaaaggcagtgtgacaaatgtaagaccacctgcttcctctcggccctggcatgttcg
aactgtccagagcgccttgtttgcctctatcatgcacaggacctttgctcttgccccagt
gaaaaactctacctcaggtatcgctatactctggatgaactcttggccatgttgcatcgg
ctgaaagttcgcgctgagtcttttgactcatgggccaaccgagtgaaggaagccctagaa
caggaagaaggcaacaaaatagacattaaagatctggaggttctgaaagaagaggcagct
gaaaagaagttccccaataatgagctgctccagcgcctcaacacagttctcacagacata
agcaagtgtgagagcagaagcacagagctccttagcagcagccagagcagtagaatgagt
ctggaggagttgaggactttggtggacaccatgcagaacctaccctgtgttatgacacag
caggaggaagtgcaggcggtattgcaanagatagaggagtttgattcacgtgctcaggct
ctggttgaccgctccaagggcgagtggaagcaggactctcctctgcccgcggcttccgag
atccaggccctgctggaggagggagcatcgctgcccgttattgccccggcatgtgagctc
ctgagcgggctgcaggagcagggtcgctggctgggagaggtcaggcgaacgttagggcca
gaggggagcgaggtgactctagctgtgctgaggaacttaatggaggcgggttgtaacgta
ccacagagcatatcagtggagactgctatggctgaactgcaagagctactgactatagcc
gagcgctgggaggagaaggcacagatctgtctggaggacaggcagaaacaccatctgtcg
acactggaggctattgtgaacgaggctcagctaataccagtgcagctgcctaacatcctg
tccctgcaggcctgcttgagccgagctcgcgcttgggtcacggacctagaggaaattcag
aacggcgagcactacccgtgtctggatgacctggaaggtttggtggccattgggcgggac
ctgccagtgaagatggaggagctgaagcagctggagctgcaggtggccagtgctcactcg
tggagagagaaagccagcaaaaccttcctgaagaagaacagccagcacagtctgctggag
gtgttgtgcccatgtgttgagaagagcaagaagagggaggagaactcgttgggtactgaa
gcagattctgatgtcaatgtattaggcctcactgctcaggaccttcgagacccaggagct
atcgtgatggcattcaaagagggggagcgtctggagaaagaggcccttcttcgccttcag
caggttaatttaactaaacccggtgtggaaaaaggagcaagcggtgatcagaacggcatc
aagatggaaaggaaacagagtgactctatggagacagacacgcccctcaactcagacagt
cccgtactgctgaatggtggacccaccccttccctcaaccctagccaatcagtatgcgtg
tgcagtggtccaccccgccccttgcttcaccggtgccatctgtgcaaagactggttccac
ggaggttgtgtgccctttccaccactgctgggctcctccgacacacatctaacaaagccc
ctctgctggtgggactggaatacacgtttcctctgtccgcggtgccaacgatcccggcgg
ccacggctagaaaccattctagccctgctggtggcgctgcagaggttacctgtacgcctg
ccagagggagaggcgttacagtgtctaacagagagagccattaactggcagggtcgagcc
aaacaggcactagacgctccagaattacagagggcgttagagagattgcaacaagtgaag
gaggaaatggtcagtataaaagaggaagaaccagttgagaaaaagaaatggaacggggat
actgtaattgtgctgtctgactcggaggaaacagaagatggtgttatcgatctgacggag
gaagtgaactcgccaaaaaaaagtgaagagaaggctgctaatggtacaccgtctggctgt
gagaatggaattgccaggaagttaagcactcatgactttacaggggtggagtctctgttg
tcactagtgccatgtctcaaagggccggtgatcgaactgagcacatccaccagagcgcag
ctggaggagcttcagctagaaggagacctgctggaggtcacgcttgaccagacacacacc
atttataggatcctacaggcggcatcacagccgccacatgatgccctgcatacgctcata
cagattgagctgcaggagcagagaagctcaggtcgtggcaacaagtcaaaagactccaag
aggaagagaaagagccagaaaactgaaggcgggcctaaatccacagaggcttcggaatgc
aagaagacgaaaccagtcagtctcacacccccctcagatccacacagagatcttgtgatg
ttttcctga

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