Megalobrama amblycephala (Wuchang bream): 125280218
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Entry
125280218 CDS
T08212
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125280218 (rbm39b)
Spliceosome [BR:
mamb03041
]
Common components
Common spliceosomal components
General mRNP proteins
125280218 (rbm39b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
125280218
NCBI-ProteinID:
XP_048066547
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Position
LG12:complement(31401606..31419035)
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AA seq
535 aa
AA seq
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MTSMLRPCWKLLIRRSKPQLEKDRGISTAVRPEKTHEVTRCKQAQQSGSGESKSSSANGH
NEERSKKKRRSNSRSPSPGRRRSRSGGRKKSRERRKSRSRERRRSRSKERKRSRSRSKDR
GGRYRGRKSPFRRRSRSKSPFKKDKSPVRQPIDNLSPEERDARTVFCMQLAARIRPRDLE
EFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEATSVPLAIGLTGQRVLGVPIIVQASQA
EKNRAAAMASMLQRGGAGPMRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRS
KGYGFISFADAECAKKALEQLNGFELAGRPMKVGHVTERSDASSASSFLDNDELERTGID
LGTTGRLQLMARLAEGTGLQIPAAAKQALQMSGSVAFGNLANASAAPPLIPNPGMNQAMN
LPTQPLATHCLQLSNMFSPQTENEPGWDMEIRDDVIEECKKHGGVVHIYVDKNSAQGNVY
VKCPTIPVAMAVVSALHGRWFAGKMITAAYVPLPTYHNLFPDAATATELLRPMHR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgatgttgaggccatgctggaagctccttataagaagatcaaaaccgcaattg
gagaaagacagaggcatcagcactgctgtccgaccagagaaaacgcatgaagtgaccagg
tgtaaacaggcccaacagtcgggttccggtgaaagcaagtcttctagcgccaatggtcat
aatgaggaacgcagcaaaaagaaaagacgcagcaacagtcgtagtccgagtccaggccgc
cggaggagtagaagtggagggcgcaagaagagccgagaacgacgcaagagccgcagccgt
gagcgaagacgttcacgaagcaaagagcgcaaacgttcaagatcccgcagcaaggatcgt
ggtggacgttatcgtggacgcaaaagcccctttcgcaggcgctctcggagcaaaagcccg
tttaagaaggacaaaagccccgtcaggcaaccgatagataatctaagcccagaagagaga
gacgcccgtacagtgttctgcatgcagctcgctgccagaattagacccagagatctggaa
gaattcttctctgcagtgggaaaagtccgtgacgtgaggatgatctcagatagaaactct
cggaggtcaaagggcattgcctacattgagtttgtggaggccacatcagtaccgctggca
atcggcctgacggggcagagagttctgggagtacctatcatagtccaggcctcgcaggct
gagaagaacagggctgcagccatggccagcatgcttcagagaggtggtgcagggcccatg
cggctgtacgttggctccctgcacttcaatataactgaggacatgctcaggggcattttt
gagccatttggaaagattgagggcatccagctaatgatggacagtgagacgggcaggtcg
aaaggatacggcttcatatcatttgcagatgcagaatgtgctaaaaaagccctggagcag
ctaaatggttttgagcttgcagggcggccaatgaaggtgggtcatgttaccgagcgttcg
gatgcctcatcggccagctccttcttggacaacgatgagctggagagaactggcattgac
ttgggcacgacgggtcgccttcagctgatggcaagactcgcagaaggcacaggactgcag
attcctgccgctgccaagcaggctttacagatgagtggttctgtggcgtttggaaatctg
gcaaatgcctcagccgcacctcctcttattcccaatccggggatgaaccaagctatgaac
cttccaacccagcctctggccacacactgtttacagctctccaacatgttcagtccacag
acggaaaacgaacctggctgggacatggagatacgggatgatgtcatcgaggagtgcaaa
aaacacggaggagttgttcacatatacgttgacaagaactctgctcaaggaaatgtttat
gtaaaatgtccaaccatcccagtagcaatggctgttgtcagcgctctgcacgggcggtgg
tttgcaggtaaaatgatcacagctgcctacgtgcccctccctacataccataacctgttt
ccagacgctgccacagccacggagctcctgaggcccatgcaccggtga
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