Megalobrama amblycephala (Wuchang bream): 125280274
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Entry
125280274 CDS
T08212
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125280274 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125280274 (dhx36)
03012 Translation factors [BR:
mamb03012
]
125280274 (dhx36)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125280274 (dhx36)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
125280274 (dhx36)
Translation factors [BR:
mamb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
125280274 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NPHP3_N
NB-ARC
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125280274
NCBI-ProteinID:
XP_048066679
LinkDB
All DBs
Position
LG1:445815..501519
Genome browser
AA seq
1028 aa
AA seq
DB search
MSHGYGNRRGRRGGGRRFGDGGSRWDGGAGSSGGVGYPRSSDWDSREEQGHGRGRKGGGG
GGGGGGGGGRGKHPPHLKGREIGLWYAKWGGIKRSEAERKSRAVVQMDESREQHITQLLN
SVQRDPGRASHPSTSQSWRVKEEPSGHSYFDGDDPPEPQNIVKVPKIEPKEEKREDELVA
NVKEDVNDTDLEYLFQDVVRTPSLDEELKKDQEKKKDNARYIDMLKFRQKLPSYGMREEL
VKLISANQVLVISGETGCGKTTQVTQFILDDFIQRGMGSLCRVVCTQPRRISAISVAERV
AAERAEPVGEGKSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSDPYLSSVSHLILDEI
HERSLQSDVLLTIVKDLLIAREDLKVVLMSATLNAEKFSKYFNNCPMIHIPGYTYPVKEF
LLEDVVELLSFQPQQQDRRPRYRRGFMHGQNTRPEKEQKEAEYRESWPCYTRTLRDRYSD
STIDTLEMMDDDEKINLELIVGLIRHIVMKEDDGAILVFLPGWDNISTLNDLLVADQMFK
SERFIIIPLHSLMPTVSQTQVFKKPPPEVRKIVIATNIAETSITIDDVVYVIDGGKIKET
HFDTQNNIRTMTAEWVSLANSKQRKGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTP
LEELCLQIKILKLGPIACFLRKTMDPPSDKAIELAITHLVDLNALDRNEELTPLGFHLAR
MPVEPHIGKMILFGALLGCLDPVLTITASLSFKDPFFIPLGKEKIADHRRKILSQNSRSD
HLTIVNAFWGWEDAKRQGGRFEREYCWENFLSANTLQMLQNMKGQFAEHLLAAGFVNSKD
PKDPSSNINSENEKLIKAVIVAGLYPKVAKIRPSHSKKRPMPVKVYTKADGKVCIHPKSV
NAEETQFHYTWLIYHLKMKTTSIFLYDCTEVSPFSLLFFGGDISIQRDQDQETIAVDEWI
VFQSPARIAHLVKELRKELDMLLEEKIKSPRPVDWNDRQSKDCAVISAIIDLITTQETPA
QDHRRGSQ
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgggtatggaaatagacgcggtcgaagaggagggggtcggcggttcggagat
ggagggtccaggtgggatggaggagctggatccagtgggggtgtaggatacccgaggagc
tctgactgggactcaagggaagagcaaggacatggaaggggacgaaaaggaggtggaggt
ggaggaggaggaggaggaggaggaggaagaggcaaacatccaccccatttgaagggtcga
gaaataggactgtggtatgccaaatggggcggcattaaaagatctgaggcagagaggaaa
tctagggctgttgttcagatggatgagtcacgagaacagcacattactcagttgctgaat
tctgtccagagagatccgggcagagcctcacatccctccacatctcagagctggagagtg
aaggaggagcccagcggccacagttactttgacggagatgatcctccagaacctcagaac
attgtgaaagtgccaaaaattgagcctaaagaggagaaacgggaagatgagctggtagca
aatgtgaaagaggacgttaatgatactgacctggaatacttattccaggatgttgtgcgg
acgccctccctggatgaggagctcaagaaagatcaggagaagaaaaaagataacgctaga
tacattgatatgctgaaattcagacagaagctcccttcctatggtatgagagaggagctg
gttaaactgatcagtgctaatcaggtactggtaatcagtggagagacaggctgtggtaag
accacccaggtcactcaattcatccttgatgacttcatccagaggggcatgggctctctc
tgcagggtggtttgcacacagccacggcgtatcagtgccatatctgttgcagagagagtg
gctgcagaaagggcagagccggtgggagaagggaagtcctgtgggtatcagatccgtctg
cagagtcggttaccacggaaacaaggctcggtgttgtattgtacaacgggcattattctt
cagtggctccgctcagatccatatctctctagtgtaagtcatctgatcctggatgaaatt
catgagaggagtcttcagtctgatgttcttctcaccatcgtgaaggacctgttaattgct
cgagaggacctaaaagtggtcctcatgagtgcaacacttaacgctgaaaaattcagcaag
tatttcaataattgtcccatgatccatattcctggatacacatacccagtaaaagagttt
ttactagaggatgtggtggaattgcttagtttccagccacagcaacaggaccgaagacct
cgctatagaagagggtttatgcacggccagaacacacggccagagaaagagcagaaagag
gctgaataccgtgagagctggccctgttacacccgtacgctcagagatcggtactcagac
agcaccattgacacgctggagatgatggatgatgatgagaagatcaatctggagcttatc
gtaggattgatccgacacattgtgatgaaagaggatgatggagcaattctagtgtttctg
cctggatgggacaacatcagcaccctaaatgatttgctcgtggctgaccagatgtttaag
tcagaacggtttatcatcatccccctccactctttgatgcccacggtctctcagactcag
gtgttcaaaaagccgccccctgaagtgcgaaagattgtgatcgcaaccaacatcgcagaa
accagtattacgatagatgatgttgtttatgtgattgatggagggaagattaaagaaact
cattttgacacccagaacaatatcaggaccatgacagcagagtgggtgagcttagccaac
tccaaacagaggaagggccgtgctggcagagtgtctccagggaaatgttatcacctgtat
aatggactgagggccagcctcctggataactaccagttacctgagatccaacgcactcca
ctggaagagctttgtttgcaaataaagatactgaagttgggccccattgcatgtttcctg
cggaaaactatggaccccccatcagacaaagcaatagagctggccatcacacacctggtg
gatctgaacgccctggaccggaatgaagagctgactccattaggatttcatctagcccgt
atgcctgtagagcctcacattggaaaaatgattctttttggggctcttctgggctgtttg
gaccctgtacttaccatcacggccagccttagctttaaagatcctttcttcataccactg
ggaaaggagaagatcgcagaccacaggagaaaaatactttcccaaaactctagaagtgat
catctcactattgtcaatgcattttggggctgggaggatgctaagagacagggcggcaga
tttgagagggaatactgctgggaaaacttcctgtctgccaacacgctgcagatgcttcag
aatatgaagggtcagtttgcagagcatcttttggcagctggctttgtgaatagtaaagac
cctaaagatcccagctctaacatcaactcagagaatgagaagctgattaaggcagtgata
gtagcgggactgtacccaaaagtggccaagattcgccctagccatagtaagaagagacca
atgccagtgaaagtgtacactaaggctgatgggaaagtttgtatccatcctaaatctgtc
aatgcagaggaaactcagttccactacacatggctcatctatcacctgaagatgaagacc
accagtatcttcctctacgactgtaccgaggtgtctccattttcattgctgttctttgga
ggggacatttccatccagagggaccaggaccaagagaccattgctgtggatgagtggatt
gtatttcagtccccagcacgcattgctcaccttgtcaaagagctgaggaaggagctggac
atgctactggaggagaagataaaaagtccacgccctgtggactggaatgaccggcagtct
aaagattgtgctgtcatctctgccataatcgacctcatcaccacacaggaaacccctgct
caagaccacaggagaggtagccagtga
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